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CAZyme Information: MGYG000004711_02238

You are here: Home > Sequence: MGYG000004711_02238

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Marinifilaceae; Odoribacter;
CAZyme ID MGYG000004711_02238
CAZy Family GH36
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
699 MGYG000004711_44|CGC1 80208.68 6.5807
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004711 3563826 MAG Spain Europe
Gene Location Start: 17874;  End: 19973  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004711_02238.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PLN02684 PLN02684 1.15e-34 196 542 168 552
Probable galactinol--sucrose galactosyltransferase
pfam05691 Raffinose_syn 6.89e-34 196 675 165 722
Raffinose synthase or seed imbibition protein Sip1. This family consists of several raffinose synthase proteins, also known as seed imbibition (Sip1) proteins. Raffinose (O-alpha- D-galactopyranosyl- (1-->6)- O-alpha- D-glucopyranosyl-(1<-->2)- O-beta- D-fructofuranoside) is a widespread oligosaccharide in plant seeds and other tissues. Raffinose synthase (EC:2.4.1.82) is the key enzyme that channels sucrose into the raffinose oligosaccharide pathway. Raffinose family oligosaccharides (RFOs) are ubiquitous in plant seeds and are thought to play critical roles in the acquisition of tolerance to desiccation and seed longevity. Raffinose synthases are alkaline alpha-galactosidases and are solely responsible for RFO breakdown in germinating maize seeds, whereas acidic galactosidases appear to have other functions. Glycoside hydrolase family 36 can be split into 11 families, GH36A to GH36K. This family includes enzymes from GH36C.
PLN02219 PLN02219 7.62e-31 196 632 165 656
probable galactinol--sucrose galactosyltransferase 2
PLN02355 PLN02355 1.93e-30 190 540 163 559
probable galactinol--sucrose galactosyltransferase 1
PLN02982 PLN02982 3.48e-14 450 632 574 771
galactinol-raffinose galactosyltransferase/ghydrolase, hydrolyzing O-glycosyl compounds

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ44008.1 1.07e-286 6 696 1 693
QUT69507.1 5.00e-285 6 696 1 693
BCA48352.1 2.02e-284 6 696 1 693
QUT41674.1 2.87e-284 6 696 1 693
QQA08088.1 2.87e-284 6 696 1 693

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q97U94 2.12e-36 198 562 189 548
Alpha-galactosidase OS=Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) OX=273057 GN=galS PE=1 SV=2
Q8RX87 1.67e-31 196 542 170 550
Probable galactinol--sucrose galactosyltransferase 6 OS=Arabidopsis thaliana OX=3702 GN=RFS6 PE=2 SV=2
Q84VX0 1.66e-30 190 537 158 551
Probable galactinol--sucrose galactosyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=RFS1 PE=2 SV=1
Q94A08 2.32e-30 119 652 97 680
Probable galactinol--sucrose galactosyltransferase 2 OS=Arabidopsis thaliana OX=3702 GN=RFS2 PE=2 SV=2
Q8VWN6 3.91e-19 199 631 202 706
Galactinol--sucrose galactosyltransferase OS=Pisum sativum OX=3888 GN=RFS PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000773 0.998307 0.000396 0.000167 0.000180 0.000170

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004711_02238.