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CAZyme Information: MGYG000004721_00307

You are here: Home > Sequence: MGYG000004721_00307

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella;
CAZyme ID MGYG000004721_00307
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1165 MGYG000004721_4|CGC1 122838.5 4.8465
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004721 2389811 MAG Denmark Europe
Gene Location Start: 23166;  End: 26663  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004721_00307.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 80 258 3.7e-50 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00063 FN3 2.57e-11 439 526 3 93
Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all animal proteins contain the FN3 repeat; including extracellular and intracellular proteins, membrane spanning cytokine receptors, growth hormone receptors, tyrosine phosphatase receptors, and adhesion molecules. FN3-like domains are also found in bacterial glycosyl hydrolases.
PRK15319 PRK15319 2.12e-08 658 1084 566 1018
fibronectin-binding autotransporter adhesin ShdA.
PRK15319 PRK15319 1.87e-07 596 1030 659 1105
fibronectin-binding autotransporter adhesin ShdA.
smart00656 Amb_all 2.39e-06 74 263 3 190
Amb_all domain.
pfam00041 fn3 5.99e-06 439 519 2 85
Fibronectin type III domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AEV97716.1 1.66e-266 23 1098 29 1105
QUT73817.1 2.35e-139 1 531 1 561
QCD38445.1 1.56e-129 11 526 13 561
QCP72135.1 1.34e-124 11 526 13 561
AYN02029.1 5.53e-121 7 529 13 569

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A1DPF0 2.26e-107 26 428 22 414
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
B0XMA2 1.18e-106 26 428 22 414
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 1.18e-106 26 428 22 414
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
B8NQQ7 4.41e-103 26 428 21 413
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 2.30e-101 26 428 21 413
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000449 0.998748 0.000220 0.000205 0.000175 0.000155

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004721_00307.