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CAZyme Information: MGYG000004721_01091

You are here: Home > Sequence: MGYG000004721_01091

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella;
CAZyme ID MGYG000004721_01091
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
507 MGYG000004721_21|CGC1 55816.82 8.4429
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004721 2389811 MAG Denmark Europe
Gene Location Start: 7393;  End: 8916  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004721_01091.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 114 434 2.5e-54 0.9015384615384615

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00295 Glyco_hydro_28 1.08e-27 152 434 45 316
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
COG5434 Pgu1 3.12e-25 47 347 73 404
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02218 PLN02218 9.56e-24 50 437 61 422
polygalacturonase ADPG
PLN02793 PLN02793 2.04e-22 125 357 109 346
Probable polygalacturonase
PLN02188 PLN02188 2.32e-18 56 434 36 391
polygalacturonase/glycoside hydrolase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNT65232.1 2.03e-184 1 442 1 452
BAV07348.1 4.13e-68 43 465 41 437
QEC72689.1 5.42e-67 43 465 50 445
QEC57624.1 1.10e-66 45 462 32 435
AYD47266.1 7.66e-64 40 443 25 415

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1BHE_A 4.00e-24 50 421 5 363
ChainA, POLYGALACTURONASE [Pectobacterium carotovorum]
6KVH_A 8.25e-14 102 343 18 264
ChainA, endo-polygalacturonase [Evansstolkia leycettana]
7E56_A 2.48e-13 102 343 10 256
ChainA, Endo-polygalacturonase [Evansstolkia leycettana]
6KVE_A 2.65e-13 102 343 18 264
ChainA, Endo-polygalacturonase [Evansstolkia leycettana]
1IA5_A 3.50e-12 151 342 72 260
PolygalacturonaseFrom Aspergillus Aculeatus [Aspergillus aculeatus],1IB4_A Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus],1IB4_B Crystal Structure of Polygalacturonase from Aspergillus Aculeatus at Ph4.5 [Aspergillus aculeatus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P26509 3.02e-23 50 421 31 389
Endo-polygalacturonase OS=Pectobacterium parmentieri OX=1905730 GN=pehA PE=1 SV=1
Q8RY29 4.18e-23 50 392 61 393
Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2
P18192 1.84e-22 64 421 46 389
Endo-polygalacturonase OS=Pectobacterium carotovorum subsp. carotovorum OX=555 GN=peh PE=3 SV=1
Q9LW07 1.34e-21 48 394 15 344
Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1
P35336 2.74e-20 20 385 53 401
Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000511 0.778775 0.219955 0.000279 0.000242 0.000209

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004721_01091.