logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004723_01310

You are here: Home > Sequence: MGYG000004723_01310

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Acutalibacter sp900548545
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Acutalibacter; Acutalibacter sp900548545
CAZyme ID MGYG000004723_01310
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
456 MGYG000004723_30|CGC2 51247.27 4.8698
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004723 2308372 MAG China Asia
Gene Location Start: 13055;  End: 14425  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004723_01310.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 158 425 3.3e-43 0.7446153846153846

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 2.11e-12 170 433 209 438
Polygalacturonase [Carbohydrate transport and metabolism].
PLN03010 PLN03010 2.62e-12 167 386 140 345
polygalacturonase
pfam00295 Glyco_hydro_28 7.38e-10 119 388 11 273
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003 PLN03003 1.91e-08 167 381 114 318
Probable polygalacturonase At3g15720
PLN02188 PLN02188 2.75e-06 194 388 158 344
polygalacturonase/glycoside hydrolase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHW32786.1 2.73e-116 14 445 25 458
QHT63269.1 1.25e-109 10 445 13 450
QOY89194.1 1.86e-66 2 445 18 444
AZN40317.1 1.43e-64 75 445 60 428
QJC51520.1 1.91e-60 57 445 43 429

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P35338 7.09e-10 196 388 166 350
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG9 PE=2 SV=1
P26216 2.95e-09 196 388 166 350
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG1 PE=1 SV=1
P43212 8.63e-09 125 388 103 370
Polygalacturonase OS=Cryptomeria japonica OX=3369 PE=1 SV=1
P35339 9.18e-09 196 388 166 350
Exopolygalacturonase OS=Zea mays OX=4577 GN=PG2C PE=2 SV=1
Q9SFB7 1.20e-06 166 389 159 381
Polygalacturonase QRT2 OS=Arabidopsis thaliana OX=3702 GN=QRT2 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000043 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004723_01310.