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CAZyme Information: MGYG000004748_00500

You are here: Home > Sequence: MGYG000004748_00500

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides;
CAZyme ID MGYG000004748_00500
CAZy Family GH10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
720 80099.56 4.6902
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004748 4696076 MAG China Asia
Gene Location Start: 145271;  End: 147433  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.8

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH10 453 715 4.2e-48 0.6798679867986799

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
smart00633 Glyco_10 6.00e-35 453 713 54 263
Glycosyl hydrolase family 10.
pfam00331 Glyco_hydro_10 9.81e-35 457 715 100 310
Glycosyl hydrolase family 10.
COG3693 XynA 1.81e-23 451 720 117 344
Endo-1,4-beta-xylanase, GH35 family [Carbohydrate transport and metabolism].
pfam00331 Glyco_hydro_10 5.05e-10 55 134 5 85
Glycosyl hydrolase family 10.
smart00633 Glyco_10 3.90e-05 93 135 1 43
Glycosyl hydrolase family 10.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ61518.1 0.0 18 720 22 721
QRQ48288.1 2.14e-298 10 720 13 719
QUT46089.1 2.01e-296 10 720 13 719
AXH21505.1 3.02e-255 10 720 8 746
EDV05072.1 3.02e-255 10 720 8 746

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4MGS_A 4.25e-70 151 301 1 150
BiXyn10ACBM1 APO [Bacteroides intestinalis DSM 17393]
4QPW_A 2.07e-64 157 299 1 142
BiXyn10ACBM1 with Xylohexaose Bound [Bacteroides intestinalis DSM 17393]
1W32_A 1.47e-14 474 720 118 348
The3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus],1W32_B The 3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus]
1W3H_A 1.62e-14 474 720 129 359
The3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus],1W3H_B The 3-dimensional structure of a thermostable mutant of a xylanase (Xyn10A) from Cellvibrio japonicus [Cellvibrio japonicus]
1CLX_A 1.95e-14 474 720 117 347
CatalyticCore Of Xylanase A [Cellvibrio japonicus],1CLX_B Catalytic Core Of Xylanase A [Cellvibrio japonicus],1CLX_C Catalytic Core Of Xylanase A [Cellvibrio japonicus],1CLX_D Catalytic Core Of Xylanase A [Cellvibrio japonicus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q4P902 3.22e-14 454 710 136 332
Endo-1,4-beta-xylanase UM03411 OS=Ustilago maydis (strain 521 / FGSC 9021) OX=237631 GN=UMAG_03411 PE=1 SV=1
P14768 3.35e-13 474 720 381 611
Endo-1,4-beta-xylanase A OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=xynA PE=1 SV=2
O94163 1.21e-12 455 717 126 327
Endo-1,4-beta-xylanase F1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=xynF1 PE=1 SV=1
Q59675 3.06e-12 474 719 375 599
Endo-beta-1,4-xylanase Xyn10C OS=Cellvibrio japonicus OX=155077 GN=xyn10C PE=1 SV=2
O69230 3.31e-12 447 715 463 709
Endo-1,4-beta-xylanase C OS=Paenibacillus barcinonensis OX=198119 GN=xynC PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000000 1.000054 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004748_00500.