CAZyme Information: MGYG000004748_02172

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
• CAZyme ID: MGYG000004748_02172
• CAZy Family: PL10
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
530	MGYG000004748_10|CGC2	60761.24	6.2538

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004748	4696076	MAG	China	Asia

• Gene Location: Start: 44225; End: 45817 Strand: +

Full Sequence      

MKKRLTFSVLLSCTLLWGAYGQTKKEQQVLQVMKTATQYMMDVASYKGGFVWSYLPDMSR
TWGEMEAKRTMAWIQPPGTPAVGHLMLDAYHATQDEYYYQCAERIANALIWGQLPCGGWN
YMFDFAGENSIKQWYATIGKSAWRLEEFQHYYGNATFDDEGTMQAAKFLLRLYIEKYDPA
YRIPLEKTIRFVLESQYPIGGWPQRYPLKDNHPFHGKTDYSAFITLNDDVIPENIDFLVQ
CYQTLGMQDLKTPIIRALNCVLALQQGAPYAGWADQYTVSDLQPAHARSYEPRSINTGTT
AHMIMKLLDYYKLTGDTKFLSGIPAAIRFLESMELPEAEAKKWKQPARGNSILVPRFIDP
ENGTPLYVHRKGTNVINGEYYTDQNIEKTIGHYNSATFININSLKEVYARTMALSKEEAT
KDSPFIQDTCLPLDRFYFKSPRYTGKDTSPETLIKSLTKEGYWLSPIKQISNPYKQAPEM
PVSNDTRYMETMVGDEYDTSPYTPEKEVLGISTGTFIENMTVLIQALQKE

Enzyme Prediction     

EC	4.2.2.2

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL10	113	395	3.8e-132	0.9963636363636363

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
TIGR02474	pec_lyase	7.81e-23	113	373	1	263	pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
pfam09492	Pec_lyase	4.76e-19	113	373	1	262	Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QUT93199.1	0.0	1	529	1	530
QJR66990.1	9.32e-256	1	529	5	537
QJR71330.1	9.32e-256	1	529	5	537
QUT87327.1	9.32e-256	1	529	5	537
QJR62731.1	9.32e-256	1	529	5	537

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1R76_A	4.31e-16	97	373	78	371	ChainA, pectate lyase [Niveispirillum irakense]
1GXM_A	1.17e-09	154	308	68	227	Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A	1.17e-08	154	308	68	227	MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.001778	0.752539	0.244663	0.000430	0.000292	0.000268

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004748_02172.