CAZyme Information: MGYG000004752_00965

Basic Information

• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Roseburia
• CAZyme ID: MGYG000004752_00965
• CAZy Family: GH136
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
254		27415.17	4.8715

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004752	1894066	MAG	China	Asia

• Gene Location: Start: 876; End: 1640 Strand: -

Full Sequence      

MGIWPFEASNTVIQYNEAYNTHSIQDGQGFDCDHASSYTVMQYNYSHNNEGGFMLIMGGY
PHTAPTVRYNVSQNDRDKAFEFSQGMPKGTMIYNNTIYSDQTVNRGIVYLSNAKVGVGVN
DAYLFNNLFHYPQGQKIYGGDGPGLPAVKKAAHFYHNGYAGGMQGPEGEEGAVYTANAGL
AAAGTGPVENTTGKARTGKSGDLDGYKLTEGSPMIDAGATMEEAVGHFGLNLQDVVDGRN
SSPRELYEAAYSMM

Enzyme Prediction     

No EC number prediction in MGYG000004752_00965.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH136	2	227	1.3e-59	0.4317718940936864

CDD Domains     

MGYG000004752_00965 has no CDD domain.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
AIY03209.1	3.10e-72	2	250	866	1113
SDS97815.1	3.62e-71	2	250	885	1132
ARX89668.1	5.16e-67	2	250	681	936
AGZ22309.1	8.30e-67	2	250	611	866
AGG63709.1	8.73e-67	2	250	631	886

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
5GQC_A	5.94e-21	2	223	354	571	Crystalstructure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_C Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_D Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_E Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_F Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_G Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQC_H Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, ligand-free form [Bifidobacterium longum subsp. longum],5GQF_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQF_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, lacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_A Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum],5GQG_B Crystal structure of lacto-N-biosidase LnbX from Bifidobacterium longum subsp. longum, galacto-N-biose complex [Bifidobacterium longum subsp. longum]
7V6I_A	1.05e-18	2	223	366	583	ChainA, Lacto-N-biosidase [Bifidobacterium saguini DSM 23967]
7V6M_A	4.63e-18	2	227	332	555	ChainA, Fibronectin type III domain-containing protein [Tyzzerella nexilis]
6KQT_A	1.14e-07	2	124	546	664	CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - native protein [Eubacterium ramulus ATCC 29099]
6KQS_A	1.58e-06	2	75	546	617	CrystalStructure of GH136 lacto-N-biosidase from Eubacterium ramulus - selenomethionine derivative [Eubacterium ramulus ATCC 29099]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000022	0.000047	0.000003	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004752_00965.