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CAZyme Information: MGYG000004757_01226

You are here: Home > Sequence: MGYG000004757_01226

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UBA6398 sp900555645
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; UBA6398; UBA6398 sp900555645
CAZyme ID MGYG000004757_01226
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
527 58773.7 6.9449
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004757 2504990 MAG China Asia
Gene Location Start: 4474;  End: 6057  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004757_01226.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 224 508 6.6e-24 0.7076923076923077

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 2.39e-10 254 392 238 371
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 3.04e-06 217 506 54 307
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCI63342.1 3.80e-158 43 509 41 508
BCI63341.1 2.66e-157 40 514 264 737
QNK57052.1 9.70e-89 64 526 41 487
QNK57056.1 8.93e-79 47 519 42 486
QJD84920.1 6.00e-78 47 524 37 486

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
A2QHG0 4.98e-07 246 506 170 412
Probable exopolygalacturonase B OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) OX=425011 GN=pgxB PE=3 SV=1
Q27UB1 4.98e-07 246 506 170 412
Exopolygalacturonase B OS=Aspergillus niger OX=5061 GN=pgxB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000300 0.999124 0.000138 0.000158 0.000132 0.000133

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004757_01226.