CAZyme Information: MGYG000004758_00006

Basic Information

• Species: Prevotella sp900553155
• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900553155
• CAZyme ID: MGYG000004758_00006
• CAZy Family: PL15
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
877	MGYG000004758_1|CGC1	99451.74	8.9871

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004758	2740450	MAG	Denmark	Europe

• Gene Location: Start: 9284; End: 11917 Strand: -

Full Sequence      

MKQLLNLYAVASLALLMLASQPAKAGDYGFNYTTKGGRIILNDSTMMHEMRQTPSPLNGE
VVTARKVSFQWPLPPELSNTTEALDGMDLKPKFKKSLISYKLRYSQDPEFKTGTVELNLM
WPMFNPDADLKEGKWYWQYAFVVSGKETWSERLSFTVGNSPAKFCPPPFSKVVEGLTDVH
PRIWVQKSSWDKFIEQAKTKKEYNWYVNKAEKVMKVPMKGLNDINLEKLSSLENEMKRKA
YITRESRRIIDAEESNGMVLVYAYLLTKNEAYAKEATKRIISMSDWNKSSSVAGDFNEST
VVSLASMAYDSFYDLLTDDERKALLNAIKVGSASMYARYNNHLENHIADNHVWQMTLRIL
TMAALATYNDMPEANTWAEFCYNVWVARMPGLNEDGAWHNGDSYFSVNTRTLIEVPWLYS
RLTGFDFFSDPWYRGNIMYTIYEQPPFSKSGGNGSTHQKVMEPRSQRIGYLDALARLTGD
TYAADFVRRTLAEKRGYLRESFLAKSGDLSWFRLQCEKPLPKGKGLASLPDGYVFPQTGL
AAFQSNWDNYKLNAEWTFRSSPYGSTSHALANQNAFNTFYGGKSLFYSSGHHTSFVDAHS
VYCHRGTRAHNTMLVDGMGQRIGTEGYGWIPRYYVGKNIGYVLGDASNAYGEVISTLWQT
RAKLTHIEFTPKTGWDKNHVKTYRRHIVDLGDSGLIFVYDELEADKPVAWNYQLHSVTAP
ITFGKEKKALHVQTTNEVGASDAYIFAPTELKADTTSKFFVPATNWLKSDSKGRFLPNPD
HWHFTASSPKSQFYHFATIVDTHAKDQKPRVPVMQKNGKIVVGDWTIELNIKADGKPFFH
VVNSVTKAEATLNEEGTAIKDGTTSTLLVDKLPKLEI

Enzyme Prediction     

No EC number prediction in MGYG000004758_00006.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
PL15	550	702	8.6e-81	0.9743589743589743

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam16332	DUF4962	0.0	45	518	2	476	Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940	Hepar_II_III	1.05e-07	529	738	3	187	Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QRM98744.1	0.0	32	877	20	867
QNL40847.1	0.0	32	877	20	867
QIU94210.1	0.0	32	877	20	867
QUR44694.1	0.0	32	877	20	867
QUT78348.1	0.0	32	877	20	867

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
6LJA_A	3.11e-260	39	877	26	868	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6LJL_A	2.28e-257	39	877	26	868	ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
3A0O_A	8.53e-36	100	722	53	667	Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A	1.44e-34	100	722	53	667	Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000276	0.998962	0.000241	0.000183	0.000171	0.000162

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004758_00006.