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CAZyme Information: MGYG000004788_00068

You are here: Home > Sequence: MGYG000004788_00068

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Companilactobacillus farciminis
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Companilactobacillus; Companilactobacillus farciminis
CAZyme ID MGYG000004788_00068
CAZy Family GH170
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
362 MGYG000004788_1|CGC1 41453.67 5.1536
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004788 2403188 MAG China Asia
Gene Location Start: 70279;  End: 71367  Strand: -

Full Sequence      Download help

MTKRSLGISL  YPDHSNLDDD  KRYLVQANRY  GFTRIFMSML  EVSEGKEKVA  KKFSDLIGFA60
KDLGFSTTLD  IAPNIFDQLG  ISYDDLDFFA  ELGADAIRLD  QGFDGQKEAL  LSYNPQNLNI120
ELNMSNDVAY  LDNILSYSAN  QPFIYGCHNF  YPQRGTGLPL  DFFISASKRF  KNHGIETAAF180
ITSQVGNIGP  WDINDGLPTL  EMHRDLPIEV  QAKHLFATNL  IDCVIIGNAY  ASEDELKKLS240
EINRYQLVFN  VELSEDINQV  EREILLDNQH  VRRGDITDLV  IRSTEVRKKY  KHNDNPVSQS300
SHDFKRGDIV  IGNDNFGKYK  NELQVVLQDH  TDERKNKVAQ  ISQTELFLLD  YVGPWNKFKF360
RR362

Enzyme Prediction      help

No EC number prediction in MGYG000004788_00068.

CAZyme Signature Domains help

Created with Snap18365472901081261441621811992172352532712893073253436360GH170
Family Start End Evalue family coverage
GH170 6 360 2.5e-117 0.9914285714285714

CDD Domains      download full data without filtering help

Created with Snap18365472901081261441621811992172352532712893073253436241DUF871_N3360COG3589247361DUF871
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam19200 DUF871_N 2.12e-125 6 241 1 235
DUF871 N-terminal domain. This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.
COG3589 COG3589 4.20e-117 3 360 1 356
Uncharacterized protein [Function unknown].
pfam05913 DUF871 1.83e-44 247 361 1 116
Bacterial protein of unknown function (DUF871). This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.

CAZyme Hits      help

Created with Snap18365472901081261441621811992172352532712893073253431362ATO47402.1|GH1701362QCX25783.1|GH1701362QMT84932.1|GH1701362AKS51047.1|GH1701362AKP02749.1|GH170
Hit ID E-Value Query Start Query End Hit Start Hit End
ATO47402.1 8.84e-267 1 362 1 362
QCX25783.1 2.72e-261 1 362 1 362
QMT84932.1 1.29e-259 1 362 1 362
AKS51047.1 1.29e-259 1 362 1 362
AKP02749.1 1.29e-259 1 362 1 362

PDB Hits      download full data without filtering help

Created with Snap183654729010812614416218119921723525327128930732534333581X7F_A73582P0O_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
1X7F_A 1.18e-150 3 358 26 381
Crystalstructure of an uncharacterized B. cereus protein [Bacillus cereus ATCC 14579]
2P0O_A 1.86e-24 7 358 6 355
Crystalstructure of a conserved protein from locus EF_2437 in Enterococcus faecalis with an unknown function [Enterococcus faecalis V583]

Swiss-Prot Hits      download full data without filtering help

Created with Snap183654729010812614416218119921723525327128930732534320362sp|A0A0H2XHV5|MUPG_STAA3
Hit ID E-Value Query Start Query End Hit Start Hit End Description
A0A0H2XHV5 6.42e-14 20 362 13 345
6-phospho-N-acetylmuramidase OS=Staphylococcus aureus (strain USA300) OX=367830 GN=mupG PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000073 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004788_00068.