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CAZyme Information: MGYG000004788_00170

You are here: Home > Sequence: MGYG000004788_00170

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Companilactobacillus farciminis
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Companilactobacillus; Companilactobacillus farciminis
CAZyme ID MGYG000004788_00170
CAZy Family GH73
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
412 MGYG000004788_2|CGC1 44731.15 4.4524
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004788 2403188 MAG China Asia
Gene Location Start: 35952;  End: 37190  Strand: -

Full Sequence      Download help

MVITRYERKL  EDSRLTRLNN  KKAKNANLRR  NLTILGSSMF  VGTAVAEVGF  SKPTPVKAEA60
LSVNNLLNQN  ITAQTLTPVS  SKGVGDEQFI  DYIGNSARKL  ASNNDLYASV  MIAQAMVESG120
WGTSGLASAP  NYNLFGIKGD  YNGESVNMGT  QEDDGSGNLY  SISSNFRKYP  SYKESLEDYV180
SLLRGGTSGD  SQIYAGAWKS  NTTSYKDATK  YLTGRYATDT  TYADKLNSMI  EKYNLTQFDV240
NNSDKDQTYT  VAQGDTLQSI  ADKFNMSTDT  LMNLNGLKTD  NYIYPGKTLT  VTKIIGNENN300
VAMTNLSNKT  TDDTGSVGDA  YGDQQAPVFV  QDERDGVKKY  VPSNDDDSST  IDVQNDYSSN360
DSDSGSQSKS  VTVQNGDTID  SIATQAGTSI  DNIKQLNNLN  SDLLVVGQTL  LV412

Enzyme Prediction      help

EC 3.2.1.- 3.2.1.17 3.2.1.96

CAZyme Signature Domains help

Created with Snap2041618210312314416418520622624726728830932935037039194235GH73
Family Start End Evalue family coverage
GH73 94 235 5e-31 0.984375

CDD Domains      download full data without filtering help

Created with Snap2041618210312314416418520622624726728830932935037039183412PRK0634767239PRK0858149248FlgJ89239LYZ294235Glucosaminidase
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK06347 PRK06347 1.42e-77 83 412 147 523
1,4-beta-N-acetylmuramoylhydrolase.
PRK08581 PRK08581 9.01e-62 67 239 303 472
amidase domain-containing protein.
COG1705 FlgJ 4.06e-60 49 248 6 200
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].
smart00047 LYZ2 1.83e-33 89 239 11 147
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
pfam01832 Glucosaminidase 3.50e-25 94 235 1 91
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.

CAZyme Hits      help

Created with Snap204161821031231441641852062262472672883093293503703911412ATO46052.1|CBM50|GH731412QMT84439.1|CBM50|GH731412QCX24328.1|CBM50|GH731412AYE38631.1|CBM50|GH731412APU71768.1|CBM50|GH73
Hit ID E-Value Query Start Query End Hit Start Hit End
ATO46052.1 2.80e-277 1 412 1 412
QMT84439.1 3.16e-265 1 412 1 413
QCX24328.1 2.16e-256 1 412 1 413
AYE38631.1 9.34e-220 1 412 1 419
APU71768.1 4.21e-218 1 412 18 437

PDB Hits      download full data without filtering help

Created with Snap20416182103123144164185206226247267288309329350370391762393FI7_A882395T1Q_A872373VWO_A872372ZYC_A872373K3T_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3FI7_A 3.97e-53 76 239 20 183
CrystalStructure of the autolysin Auto (Lmo1076) from Listeria monocytogenes, catalytic domain [Listeria monocytogenes EGD-e]
5T1Q_A 1.44e-45 88 239 62 212
ChainA, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_B Chain B, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_C Chain C, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325],5T1Q_D Chain D, N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 [Staphylococcus aureus subsp. aureus NCTC 8325]
3VWO_A 7.11e-13 87 237 2 150
Crystalstructure of peptidoglycan hydrolase mutant from Sphingomonas sp. A1 [Sphingomonas sp. A1]
2ZYC_A 8.59e-13 87 237 3 151
ChainA, Peptidoglycan hydrolase FlgJ [Sphingomonas sp. A1]
3K3T_A 5.47e-12 87 237 3 151
E185Amutant of peptidoglycan hydrolase from Sphingomonas sp. A1 [Sphingomonas sp. A1]

Swiss-Prot Hits      download full data without filtering help

Created with Snap2041618210312314416418520622624726728830932935037039172412sp|P37710|ALYS_ENTFA37291sp|P39046|MUR2_ENTHA88239sp|Q2G222|Y2979_STAA848292sp|A2RHZ5|ACMA_LACLM48292sp|P0C2T5|ACMA_LACLC
Hit ID E-Value Query Start Query End Hit Start Hit End Description
P37710 1.62e-48 72 412 167 472
Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2
P39046 2.42e-45 37 291 24 298
Muramidase-2 OS=Enterococcus hirae (strain ATCC 9790 / DSM 20160 / JCM 8729 / LMG 6399 / NBRC 3181 / NCIMB 6459 / NCDO 1258 / NCTC 12367 / WDCM 00089 / R) OX=768486 GN=EHR_05900 PE=1 SV=1
Q2G222 9.44e-44 88 239 322 472
N-acetylmuramoyl-L-alanine amidase domain-containing protein SAOUHSC_02979 OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=SAOUHSC_02979 PE=1 SV=1
A2RHZ5 4.24e-42 48 292 21 287
Probable N-acetylmuramidase OS=Lactococcus lactis subsp. cremoris (strain MG1363) OX=416870 GN=acmA PE=3 SV=1
P0C2T5 8.18e-42 48 292 21 287
Probable N-acetylmuramidase OS=Lactococcus lactis subsp. cremoris OX=1359 GN=acmA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.755666 0.225288 0.014854 0.001703 0.002252 0.000231

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004788_00170.