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CAZyme Information: MGYG000004788_01491

You are here: Home > Sequence: MGYG000004788_01491

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Companilactobacillus farciminis
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Companilactobacillus; Companilactobacillus farciminis
CAZyme ID MGYG000004788_01491
CAZy Family GH170
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
361 MGYG000004788_28|CGC1 40981.2 5.4296
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004788 2403188 MAG China Asia
Gene Location Start: 20486;  End: 21571  Strand: -

Full Sequence      Download help

MRRLGLSLYP  EHSTLAEDKK  YLDTASKLGY  SRIFASLLEL  GDDKDKTINR  FKETIAYGNK60
LGFVTIVDMN  PRLFKALDIS  YDDLSFFHEL  GAFGIRLDEG  FSGMEEAKMT  RNPYGLKIEI120
NMSSGTHYLD  NILSYHPNKD  NLLGCHNFYP  QRYTGLGEDF  FIKWSNFFKE  RNIHSAAFVS180
SHNATFGPWP  VQDGLPTLED  DRDLPISTQV  KHLLLSGVVD  DVIIGNTYAS  DEELKEAADA240
FYAPVPVLKV  DLSSDITDLE  KEVILKSTHV  YRGDASDYLL  RSTMTRVVYK  DGNFPAHDTQ300
DIKRGDIIIV  NENYGQYKGE  TQIALRDIKN  DGRRNIVGHL  NSNEAFLLSY  IKPWSSFKLA360
E361

Enzyme Prediction      help

No EC number prediction in MGYG000004788_01491.

CAZyme Signature Domains help

Created with Snap18365472901081261441621801982162342522702883063243423359GH170
Family Start End Evalue family coverage
GH170 3 359 2e-120 0.9942857142857143

CDD Domains      download full data without filtering help

Created with Snap18365472901081261441621801982162342522702883063243421361COG35894238DUF871_N246359DUF871
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3589 COG3589 1.60e-142 1 361 1 358
Uncharacterized protein [Function unknown].
pfam19200 DUF871_N 3.44e-126 4 238 1 234
DUF871 N-terminal domain. This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.
pfam05913 DUF871 6.61e-49 246 359 1 115
Bacterial protein of unknown function (DUF871). This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.

CAZyme Hits      help

Created with Snap18365472901081261441621801982162342522702883063243421361ATO46617.1|GH1701361QCX24906.1|GH1701361AKS52355.1|GH1701361AKP04050.1|GH1701361QMT83883.1|GH170
Hit ID E-Value Query Start Query End Hit Start Hit End
ATO46617.1 3.47e-268 1 361 1 361
QCX24906.1 7.52e-263 1 361 1 361
AKS52355.1 2.16e-262 1 361 1 361
AKP04050.1 2.16e-262 1 361 1 361
QMT83883.1 2.16e-262 1 361 1 361

PDB Hits      download full data without filtering help

Created with Snap183654729010812614416218019821623425227028830632434223611X7F_A53592P0O_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
1X7F_A 3.62e-122 2 361 27 385
Crystalstructure of an uncharacterized B. cereus protein [Bacillus cereus ATCC 14579]
2P0O_A 7.67e-26 5 359 6 357
Crystalstructure of a conserved protein from locus EF_2437 in Enterococcus faecalis with an unknown function [Enterococcus faecalis V583]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000030 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004788_01491.