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CAZyme Information: MGYG000004789_00477
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Streptococcus sp001556435 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus sp001556435 | |||||||||||
| CAZyme ID | MGYG000004789_00477 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 36438; End: 37148 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd13925 | RPF | 5.13e-10 | 177 | 234 | 1 | 68 | core lysozyme-like domain of resuscitation-promoting factor proteins. Resuscitation-promoting factor (RPF) proteins, found in various (G+C)-rich Gram-positive bacteria, act to reactivate cultures from stationary phase. This protein shares elements of the structural core of lysozyme and related proteins. Furthermore, it shares a conserved active site glutamate which is required for activity, and has a polysaccharide binding cleft that corresponds to the peptidoglycan binding cleft of lysozyme. Muralytic activity of Rpf in Micrococcus luteus correlates with resuscitation, supporting a mechanism dependent on cleavage of peptidoglycan by RPF. |
| cd00254 | LT-like | 6.03e-04 | 181 | 211 | 6 | 36 | lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
| COG0741 | MltE | 0.001 | 133 | 209 | 112 | 187 | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell wall/membrane/envelope biogenesis]. |
| cd00442 | Lyz-like | 0.002 | 178 | 224 | 1 | 58 | lysozyme-like domains. This family contains several members, including soluble lytic transglycosylases (SLT), goose egg-white lysozymes (GEWL), hen egg-white lysozymes (HEWL), chitinases, bacteriophage lambda lysozymes, endolysins, autolysins, chitosanases, and pesticin. Typical members are involved in the hydrolysis of beta-1,4- linked polysaccharides. |
| pfam01464 | SLT | 0.006 | 173 | 213 | 9 | 46 | Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| CCB96357.1 | 9.29e-125 | 1 | 236 | 1 | 232 |
| VED90321.1 | 7.35e-124 | 1 | 236 | 1 | 231 |
| AMB83601.1 | 7.35e-124 | 1 | 236 | 1 | 231 |
| ARC48763.1 | 3.10e-123 | 1 | 236 | 1 | 232 |
| ARC23391.1 | 8.86e-123 | 1 | 236 | 1 | 232 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q8CMZ9 | 6.52e-35 | 143 | 234 | 142 | 233 | Probable transglycosylase IsaA OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=isaA PE=3 SV=1 |
| Q5HL49 | 6.52e-35 | 143 | 234 | 142 | 233 | Probable transglycosylase IsaA OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=isaA PE=3 SV=1 |
| Q6GDN1 | 4.83e-30 | 146 | 236 | 143 | 233 | Probable transglycosylase IsaA OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=isaA PE=3 SV=1 |
| Q2YWD9 | 1.88e-29 | 146 | 236 | 143 | 233 | Probable transglycosylase IsaA OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) OX=273036 GN=isaA PE=3 SV=1 |
| Q6G6A5 | 7.32e-29 | 146 | 236 | 143 | 233 | Probable transglycosylase IsaA OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=isaA PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.748792 | 0.241679 | 0.002033 | 0.001628 | 0.000721 | 0.005165 |
