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CAZyme Information: MGYG000004797_00058

You are here: Home > Sequence: MGYG000004797_00058

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sartorii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sartorii
CAZyme ID MGYG000004797_00058
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
477 MGYG000004797_1|CGC2 53592.16 8.1781
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004797 5247182 MAG China Asia
Gene Location Start: 102443;  End: 103876  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004797_00058.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 174 443 4.5e-34 0.7876923076923077

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00295 Glyco_hydro_28 0.002 219 410 100 274
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
COG5434 Pgu1 0.005 216 376 237 397
Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QJR65187.1 0.0 1 477 1 477
QJR73783.1 0.0 1 477 1 477
QJR69450.1 0.0 1 477 1 477
QEW35608.1 0.0 1 477 1 477
QJR77947.1 0.0 19 477 19 478

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.456013 0.537406 0.004619 0.000580 0.000421 0.000950

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004797_00058.