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CAZyme Information: MGYG000004797_00340

You are here: Home > Sequence: MGYG000004797_00340

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola sartorii
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola sartorii
CAZyme ID MGYG000004797_00340
CAZy Family PL10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
713 MGYG000004797_3|CGC3 81581.77 8.0338
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004797 5247182 MAG China Asia
Gene Location Start: 54516;  End: 56657  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004797_00340.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL10 67 358 5.3e-111 0.9965277777777778
CE8 411 637 3.3e-25 0.7743055555555556

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam09492 Pec_lyase 6.39e-175 67 359 1 289
Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
TIGR02474 pec_lyase 1.73e-109 67 358 1 289
pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
pfam01095 Pectinesterase 4.68e-05 404 461 1 65
Pectinesterase.
PLN02497 PLN02497 8.43e-05 412 504 46 128
probable pectinesterase
PLN02488 PLN02488 0.003 392 493 186 292
probable pectinesterase/pectinesterase inhibitor

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QJR66036.1 0.0 1 713 1 713
QJR70737.1 0.0 1 713 1 713
QJR70297.1 0.0 1 713 1 713
QUT60181.1 0.0 1 713 1 713
QQY42159.1 0.0 1 713 1 713

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1R76_A 5.16e-56 49 365 76 404
ChainA, pectate lyase [Niveispirillum irakense]
1GXM_A 5.24e-48 60 350 37 314
Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A 6.80e-47 60 350 37 314
MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000432 0.998832 0.000180 0.000195 0.000167 0.000157

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004797_00340.