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CAZyme Information: MGYG000004823_02452

You are here: Home > Sequence: MGYG000004823_02452

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species CAG-462 sp900765575
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; CAG-462; CAG-462 sp900765575
CAZyme ID MGYG000004823_02452
CAZy Family PL10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
539 62090.95 6.2026
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004823 3872922 MAG China Asia
Gene Location Start: 3724;  End: 5343  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 4.2.2.2

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL10 121 404 3.8e-134 0.9963636363636363

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
TIGR02474 pec_lyase 6.83e-21 121 402 1 282
pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
pfam09492 Pec_lyase 3.74e-17 121 382 1 262
Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QJR66990.1 0.0 1 539 1 537
QJR71330.1 0.0 1 539 1 537
QUT87327.1 0.0 1 539 1 537
QJR62731.1 0.0 1 539 1 537
QJR75374.1 0.0 1 539 1 537

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1R76_A 1.42e-15 105 405 78 393
ChainA, pectate lyase [Niveispirillum irakense]
1GXM_A 2.13e-08 114 382 37 296
Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A 2.10e-07 114 382 37 296
MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.003406 0.831779 0.163920 0.000394 0.000248 0.000232

TMHMM  Annotations      download full data without filtering help

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