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CAZyme Information: MGYG000004824_00134

You are here: Home > Sequence: MGYG000004824_00134

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Paraprevotella;
CAZyme ID MGYG000004824_00134
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
471 MGYG000004824_1|CGC3 53391.61 5.7593
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004824 2984736 MAG China Asia
Gene Location Start: 165393;  End: 166808  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004824_00134.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 195 459 2.7e-43 0.76

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 3.57e-12 219 458 239 434
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.25e-10 198 429 88 246
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 3.72e-07 178 430 115 355
polygalacturonase
PLN02218 PLN02218 5.24e-06 225 452 199 412
polygalacturonase ADPG
PLN02793 PLN02793 8.00e-05 202 417 184 364
Probable polygalacturonase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUU00181.1 2.67e-250 10 471 3 464
ALJ62050.1 6.49e-248 15 471 4 461
QUT92200.1 1.31e-247 15 471 4 461
QUT34117.1 1.70e-246 10 471 3 464
AII64640.1 4.35e-246 29 471 18 461

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.270786 0.603872 0.122976 0.000544 0.000515 0.001290

TMHMM  Annotations      download full data without filtering help

start end
13 35