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CAZyme Information: MGYG000004824_00920

You are here: Home > Sequence: MGYG000004824_00920

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Paraprevotella;
CAZyme ID MGYG000004824_00920
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
487 MGYG000004824_7|CGC2 56154.11 6.4472
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004824 2984736 MAG China Asia
Gene Location Start: 45761;  End: 47224  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004824_00920.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 147 466 4.6e-41 0.8153846153846154

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 6.92e-14 230 470 237 473
Polygalacturonase [Carbohydrate transport and metabolism].
PLN02218 PLN02218 1.49e-07 238 465 199 410
polygalacturonase ADPG
PLN03010 PLN03010 1.08e-05 97 405 13 317
polygalacturonase
pfam00295 Glyco_hydro_28 2.46e-05 211 430 88 273
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03003 PLN03003 0.006 211 429 141 326
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUU00181.1 1.66e-171 4 486 6 464
QUT92200.1 8.00e-169 13 486 12 461
QUT34117.1 1.26e-168 4 486 6 464
ALJ62050.1 2.28e-168 13 486 12 461
QQY39815.1 9.19e-168 3 486 2 461

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUR_A 4.38e-07 220 465 180 412
Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.004758 0.968895 0.025515 0.000282 0.000269 0.000256

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004824_00920.