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CAZyme Information: MGYG000004824_01542

You are here: Home > Sequence: MGYG000004824_01542

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Paraprevotella;
CAZyme ID MGYG000004824_01542
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
483 MGYG000004824_17|CGC1 53922.63 8.5911
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004824 2984736 MAG China Asia
Gene Location Start: 27145;  End: 28596  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004824_01542.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 198 451 3e-33 0.7538461538461538

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam00295 Glyco_hydro_28 0.008 226 462 100 310
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ALJ62060.1 2.41e-263 1 482 17 490
QUT92189.1 2.41e-263 1 482 17 490
QUT34116.1 4.14e-260 1 482 1 483
QDO69870.1 4.22e-260 7 483 8 475
QUU00182.1 3.75e-256 1 482 1 483

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000214 0.999194 0.000151 0.000157 0.000141 0.000132

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004824_01542.