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CAZyme Information: MGYG000004845_00313

You are here: Home > Sequence: MGYG000004845_00313

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; UBA4716;
CAZyme ID MGYG000004845_00313
CAZy Family CE12
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1778 192187.13 4.1323
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004845 2789282 MAG Sweden Europe
Gene Location Start: 20085;  End: 25421  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004845_00313.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 1403 1728 3.4e-45 0.8645833333333334
CE12 250 476 1.3e-42 0.9952380952380953

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd01821 Rhamnogalacturan_acetylesterase_like 4.20e-38 249 476 1 198
Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
PLN02773 PLN02773 6.95e-25 1400 1718 5 250
pectinesterase
PLN02682 PLN02682 1.37e-24 1384 1718 53 315
pectinesterase family protein
PLN02665 PLN02665 9.58e-21 1400 1714 68 304
pectinesterase family protein
PLN02497 PLN02497 5.37e-19 1571 1714 144 270
probable pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUO18387.1 1.27e-182 39 1028 118 1092
AUO20403.1 2.79e-165 3 1778 2 1719
AUO19003.1 7.40e-128 1051 1776 1102 1806
QYR22257.1 8.27e-121 65 1001 72 698
QYR20260.1 7.31e-114 54 586 61 561

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1GQ8_A 8.89e-08 1402 1762 9 301
Pectinmethylesterase from Carrot [Daucus carota]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O31523 7.02e-18 251 476 8 212
Rhamnogalacturonan acetylesterase RhgT OS=Bacillus subtilis (strain 168) OX=224308 GN=rhgT PE=1 SV=1
O31528 1.96e-16 251 476 5 202
Probable rhamnogalacturonan acetylesterase YesY OS=Bacillus subtilis (strain 168) OX=224308 GN=yesY PE=1 SV=1
Q9LVQ0 8.34e-11 1409 1718 16 250
Pectinesterase 31 OS=Arabidopsis thaliana OX=3702 GN=PME31 PE=1 SV=1
Q9SIJ9 2.67e-09 1570 1727 152 289
Putative pectinesterase 11 OS=Arabidopsis thaliana OX=3702 GN=PME11 PE=3 SV=1
P42304 2.30e-08 50 429 25 350
Uncharacterized esterase YxiM OS=Bacillus subtilis (strain 168) OX=224308 GN=yxiM PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000549 0.558151 0.440335 0.000386 0.000303 0.000238

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004845_00313.