You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000004845_01158
You are here: Home > Sequence: MGYG000004845_01158
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; UBA4716; | |||||||||||
| CAZyme ID | MGYG000004845_01158 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 86591; End: 88123 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 115 | 470 | 1.2e-72 | 0.9230769230769231 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 5.19e-76 | 11 | 499 | 4 | 518 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| PLN03010 | PLN03010 | 3.14e-23 | 91 | 480 | 45 | 391 | polygalacturonase |
| pfam00295 | Glyco_hydro_28 | 1.27e-21 | 193 | 470 | 54 | 307 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN02218 | PLN02218 | 6.95e-21 | 93 | 470 | 68 | 412 | polygalacturonase ADPG |
| PLN03003 | PLN03003 | 3.69e-19 | 90 | 392 | 21 | 293 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AIQ45845.1 | 2.30e-184 | 6 | 496 | 13 | 506 |
| AIQ51483.1 | 9.62e-181 | 6 | 496 | 13 | 506 |
| AIQ57019.1 | 7.77e-178 | 6 | 496 | 13 | 505 |
| AFC29187.1 | 2.26e-173 | 6 | 492 | 13 | 501 |
| AFH61358.1 | 1.29e-172 | 6 | 492 | 13 | 501 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3JUR_A | 2.78e-47 | 93 | 503 | 28 | 446 | Thecrystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_B The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_C The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima],3JUR_D The crystal structure of a hyperthermoactive Exopolygalacturonase from Thermotoga maritima [Thermotoga maritima] |
| 2UVE_A | 1.13e-35 | 37 | 384 | 99 | 484 | Structureof Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVE_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase [Yersinia enterocolitica],2UVF_A Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica],2UVF_B Structure of Yersinia enterocolitica Family 28 Exopolygalacturonase in Complex with Digalaturonic Acid [Yersinia enterocolitica] |
| 5OLP_A | 4.83e-33 | 95 | 385 | 47 | 355 | Galacturonidase[Bacteroides thetaiotaomicron VPI-5482],5OLP_B Galacturonidase [Bacteroides thetaiotaomicron VPI-5482] |
| 1BHE_A | 7.30e-17 | 109 | 465 | 26 | 359 | ChainA, POLYGALACTURONASE [Pectobacterium carotovorum] |
| 4C2L_A | 4.79e-13 | 100 | 395 | 23 | 299 | Crystalstructure of endo-xylogalacturonan hydrolase from Aspergillus tubingensis [Aspergillus tubingensis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| A7PZL3 | 2.94e-37 | 97 | 465 | 67 | 422 | Probable polygalacturonase OS=Vitis vinifera OX=29760 GN=GSVIVT00026920001 PE=1 SV=1 |
| P15922 | 1.19e-31 | 55 | 389 | 114 | 482 | Exo-poly-alpha-D-galacturonosidase OS=Dickeya chrysanthemi OX=556 GN=pehX PE=1 SV=1 |
| Q8RY29 | 1.53e-21 | 93 | 469 | 68 | 410 | Polygalacturonase ADPG2 OS=Arabidopsis thaliana OX=3702 GN=ADPG2 PE=2 SV=2 |
| P35336 | 1.61e-19 | 90 | 465 | 87 | 426 | Polygalacturonase OS=Actinidia deliciosa OX=3627 PE=2 SV=1 |
| Q9LW07 | 2.01e-19 | 90 | 403 | 21 | 304 | Probable polygalacturonase At3g15720 OS=Arabidopsis thaliana OX=3702 GN=At3g15720 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000002 | 0.000029 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |