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CAZyme Information: MGYG000004845_02099

You are here: Home > Sequence: MGYG000004845_02099

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; UBA4716;
CAZyme ID MGYG000004845_02099
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
706 77185.19 4.6149
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004845 2789282 MAG Sweden Europe
Gene Location Start: 10763;  End: 12883  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004845_02099.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 232 430 1.4e-30 0.8811881188118812
CBM13 561 704 1.2e-21 0.6914893617021277

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 5.17e-24 167 472 17 324
Pectate lyase [Carbohydrate transport and metabolism].
pfam14200 RicinB_lectin_2 1.10e-19 558 641 10 89
Ricin-type beta-trefoil lectin domain-like.
smart00656 Amb_all 2.74e-19 243 423 12 181
Amb_all domain.
pfam00544 Pec_lyase_C 1.06e-11 245 399 32 189
Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.
cd00161 RICIN 1.15e-09 563 702 1 124
Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ligand binding occurs on exposed surfaces of the compact domain sturcture.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUO18238.1 0.0 13 705 16 707
CDM70399.1 7.18e-253 37 705 35 696
ASR46637.1 1.39e-149 29 528 32 535
ANY68265.1 5.14e-138 26 528 29 537
CBL17651.1 5.43e-98 30 668 31 653

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3ZSC_A 1.06e-09 197 398 20 213
Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima]
1PCL_A 1.10e-07 194 474 14 330
ChainA, PECTATE LYASE E [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P94449 7.79e-23 180 510 35 336
Pectin lyase OS=Bacillus subtilis OX=1423 GN=pelB PE=1 SV=1
O34819 1.91e-22 180 510 35 336
Pectin lyase OS=Bacillus subtilis (strain 168) OX=224308 GN=pelB PE=3 SV=1
Q0CBV0 5.86e-15 194 469 42 302
Probable pectate lyase B OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyB PE=3 SV=1
Q00645 1.43e-14 194 398 43 235
Pectate lyase plyB OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyB PE=1 SV=1
Q2TZY0 1.92e-14 194 398 43 235
Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000397 0.998852 0.000181 0.000192 0.000171 0.000152

TMHMM  Annotations      download full data without filtering help

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