logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004849_00050

You are here: Home > Sequence: MGYG000004849_00050

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UMGS1826;
CAZyme ID MGYG000004849_00050
CAZy Family PL15
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
859 MGYG000004849_1|CGC1 96868.87 4.7967
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004849 3246607 MAG China Asia
Gene Location Start: 56028;  End: 58607  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004849_00050.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL15 482 612 6.4e-31 0.9850746268656716

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16332 DUF4962 2.67e-24 16 431 13 448
Domain of unknown function (DUF4962). This family consists of uncharacterized proteins around 870 residues in length and is mainly found in various Bacteroides species. The function of this protein is unknown.
pfam07940 Hepar_II_III 1.06e-12 469 614 7 152
Heparinase II/III-like protein. This family features sequences that are similar to a region of the Flavobacterium heparinum proteins heparinase II and heparinase III. The former is known to degrade heparin and heparin sulphate, whereas the latter predominantly degrades heparin sulphate. Both are secreted into the periplasmic space upon induction with heparin.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QNK58733.1 4.05e-163 9 859 49 882
ANK82807.1 1.17e-76 5 639 47 682
QTN01574.1 1.07e-71 10 707 12 723
AVR95980.1 1.67e-71 24 614 6 592
CDN57294.1 2.41e-71 7 681 17 698

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3A0O_A 2.35e-68 7 681 18 700
Crystalstructure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58],3A0O_B Crystal structure of alginate lyase from Agrobacterium tumefaciens C58 [Agrobacterium fabrum str. C58]
3AFL_A 5.50e-67 7 681 18 700
Crystalstructure of exotype alginate lyase Atu3025 H531A complexed with alginate trisaccharide [Agrobacterium fabrum str. C58]
6LJA_A 1.62e-25 16 622 43 699
ChainA, Heparinase II/III-like protein [Bacteroides intestinalis DSM 17393]
6JPN_A 2.00e-07 198 554 91 457
Crystalstructure of the catalytic domain of a multi-domain alginate lyase Dp0100 from thermophilic bacterium Defluviitalea phaphyphila [Defluviitalea phaphyphila]
6JP4_A 3.46e-07 198 554 90 456
Crystalstructure of the catalytic domain of a multi-domain alginate lyase Dp0100 from thermophilic bacterium Defluviitalea phaphyphila [Defluviitalea phaphyphila],6JP4_B Crystal structure of the catalytic domain of a multi-domain alginate lyase Dp0100 from thermophilic bacterium Defluviitalea phaphyphila [Defluviitalea phaphyphila],6JP4_C Crystal structure of the catalytic domain of a multi-domain alginate lyase Dp0100 from thermophilic bacterium Defluviitalea phaphyphila [Defluviitalea phaphyphila],6JP4_D Crystal structure of the catalytic domain of a multi-domain alginate lyase Dp0100 from thermophilic bacterium Defluviitalea phaphyphila [Defluviitalea phaphyphila]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000059 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004849_00050.