CAZyme Information: MGYG000004849_00439

Basic Information

• Lineage: Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; UMGS1826
• CAZyme ID: MGYG000004849_00439
• CAZy Family: GH78
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
647	MGYG000004849_10|CGC1	74095.63	4.6041

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004849	3246607	MAG	China	Asia

• Gene Location: Start: 9791; End: 11734 Strand: +

Full Sequence      

MEQNHARWIWYPGDYEIYHSLLLHGRRDDFDWRSPAFWRLDSCWPSVEFYRTLENEEPLE
IEVRIHGSGHVTIDDVTMTCGKLTVPPGSHWIQIWVYKPAGLPSAYVTGGGLDSGEGWTV
TCHDGEYRAAGWSDWYTSPDSDPEVFPFAYEPIEPVSAEPMKEGLLYDYGKETFARMTVR
TGDAPVRICYGESREEALDPENCVVRDRLPAHTEAVLPARALRYLCVDAPADIKAEYEYL
PLERKGSFRSSDETLNHIWETCAYTFHLNSREFFLDGIKRDRWVWSGDAYQSYLVNDYLF
RDEAITRRTILALRGKEPVRTHINTIQDYSFYWIMSVGERFLRCGDLEFVRTLWPSMESL
MEFCLSRTDGEGLAVQREGDWIFIDWGELDKEGGACIEQMLLVRSLETMAECAGLLGKDG
DRYAALASGLREKVERLYWDGEKGAYIDSFRSGKRFVSRQTNLFALRYGFDGGGRREQIL
ENVLLNSTVPPITTPYFKFYEMEAWCEMGRLDYVREQISAYWGGMLRLGATSIWETFDPR
EEGAAHYAMYGCPFGKSLCHAWGASPIYLLGKYFLGVDAKADGFTVRPQLGGLEWMEGTV
PVQGGMVRVFCDGKTLRVESDAEGGILIWQERTLEIPVSEPLVLEFS

Enzyme Prediction     

EC	3.2.1.40

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH78	163	611	2e-91	0.9404761904761905

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam17389	Bac_rhamnosid6H	4.43e-25	243	573	1	339	Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
COG3408	GDB1	4.57e-05	299	486	298	512	Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QYR22424.1	7.24e-230	8	627	7	637
QKS45153.1	4.38e-225	6	644	7	658
QEL00882.1	6.48e-202	3	627	30	689
QEM08890.1	1.40e-193	6	627	34	691
QNL52267.1	7.44e-193	3	633	29	695

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3CIH_A	1.65e-175	8	632	20	697	Crystalstructure of a putative alpha-rhamnosidase from Bacteroides thetaiotaomicron [Bacteroides thetaiotaomicron VPI-5482]
2OKX_A	3.89e-47	220	609	503	915	Crystalstructure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1],2OKX_B Crystal structure of GH78 family rhamnosidase of Bacillus SP. GL1 AT 1.9 A [Bacillus sp. GL1]
4XHC_A	5.12e-35	183	575	119	543	ChainA, Alpha-L-rhamnosidase [Klebsiella oxytoca],4XHC_B Chain B, Alpha-L-rhamnosidase [Klebsiella oxytoca]

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000038	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004849_00439.