CAZyme Information: MGYG000004852_01106

Basic Information

• Lineage: Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium
• CAZyme ID: MGYG000004852_01106
• CAZy Family: CBM50
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
522		58978.98	4.5316

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004852	2526742	MAG	China	Asia

• Gene Location: Start: 22; End: 1590 Strand: +

Full Sequence      

MSQIDIVKESIQNEQLLRENATNNVLKGEYLIKDSHPDVYQILGIEAKATITNKETLADK
IMIEGQINYSVIYLSEDESKVTSINSVSLSEKFADYLDLNNEEHKVICEVECIIEHIQAS
IMNERKIAIDGIRTTKWQLYKVEEFEFVKEIEGRDDIQIKRKSEEMNQIKCEKDIELMGK
SMIKVTMDKPEISEILKSSMNLHKKEVKLGDGKIYFGCYCKIEVLCKGKDENDIFLLQDD
IYLSKEEEAIGVNSEMMTSHQIDIVNSDSIINADDLGENRVVNVEFMIKGTIKVISKDIV
DVIKDAYSPTKSIELSKKNYEIGLVHGIVTSELIIKDNLYPKDENDKIGCVVCATGCPVI
TDKTVEEDKIKIEGMIKTSVLYKTTDDDCKIDMCNGEIPFTSVIDLKGTKPDMVALCKVH
LENLDATVEANTIGVRATLSVLVKVCYKVNKEWIVDIVEGEEEKECKKASVTIYVVNIGD
TLWDLAKKYNTTMDSLIEINELEGPESLIEGKKLIIPGKCKF

Enzyme Prediction     

No EC number prediction in MGYG000004852_01106.

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam12673	DUF3794	6.69e-11	351	428	5	79	Domain of unknown function (DUF3794). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, and is approximately 90 amino acids in length. The family is found in association with pfam01476.
pfam01476	LysM	4.65e-09	474	517	1	43	LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known.
pfam12673	DUF3794	5.75e-09	38	121	1	79	Domain of unknown function (DUF3794). This presumed domain is functionally uncharacterized. This domain family is found in bacteria, and is approximately 90 amino acids in length. The family is found in association with pfam01476.
cd00118	LysM	1.22e-08	472	516	1	45	Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes.
smart00257	LysM	9.47e-07	473	516	1	44	Lysin motif.

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QAS60116.1	4.19e-228	1	522	1	526
AYE34715.1	4.19e-228	1	522	1	526
QSW20298.1	4.57e-225	1	522	1	526
ATD56377.1	1.30e-224	1	522	1	526
ATD55952.1	1.30e-224	1	522	1	526

PDB Hits     

has no PDB hit.

Swiss-Prot Hits     

has no Swissprot hit.

SignalP and Lipop Annotations

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.999981	0.000049	0.000001	0.000000	0.000000	0.000000

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004852_01106.