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CAZyme Information: MGYG000004854_01676

You are here: Home > Sequence: MGYG000004854_01676

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus;
CAZyme ID MGYG000004854_01676
CAZy Family PL10
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
942 MGYG000004854_8|CGC1 103733.37 4.6545
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004854 2725669 MAG Spain Europe
Gene Location Start: 5873;  End: 8701  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004854_01676.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL10 75 343 1.2e-105 0.9756944444444444
CE8 374 696 1.2e-56 0.90625

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam09492 Pec_lyase 4.18e-109 71 341 1 284
Pectic acid lyase. Members of this family are isozymes of pectate lyase (EC:4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
TIGR02474 pec_lyase 2.67e-105 71 341 1 285
pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
PLN02671 PLN02671 3.46e-31 363 694 55 331
pectinesterase
PLN02773 PLN02773 1.01e-30 378 708 16 286
pectinesterase
PLN02682 PLN02682 1.19e-30 368 695 71 342
pectinesterase family protein

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADU21605.1 0.0 1 897 1 896
QNU66057.1 5.23e-180 1 897 1 819
ADL49995.1 8.46e-121 348 720 23 405
ACL75601.1 2.24e-113 44 354 39 346
AEY65183.1 4.68e-113 44 355 39 347

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1R76_A 1.05e-56 50 340 73 392
ChainA, pectate lyase [Niveispirillum irakense]
1GXM_A 2.37e-56 60 341 33 318
Family10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXM_B Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus],1GXN_A Family 10 polysaccharide lyase from Cellvibrio cellulosa [Cellvibrio japonicus]
1GXO_A 2.94e-55 60 341 33 318
MutantD189A of Family 10 polysaccharide lyase from Cellvibrio cellulosa in complex with trigalaturonic acid [Cellvibrio japonicus]
3UW0_A 2.38e-09 370 693 35 342
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
1QJV_A 6.58e-09 464 716 77 339
ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q9FM79 1.86e-18 381 694 94 352
Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1
Q2UBD9 2.08e-14 533 693 142 296
Probable pectinesterase A OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=pmeA PE=3 SV=1
B8NPS7 2.08e-14 533 693 142 296
Probable pectinesterase A OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=pmeA PE=3 SV=1
Q9ZQA3 6.02e-14 378 672 100 338
Probable pectinesterase 15 OS=Arabidopsis thaliana OX=3702 GN=PME15 PE=2 SV=1
A1DBT4 1.21e-13 533 719 142 324
Probable pectinesterase A OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=pmeA PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.002293 0.996095 0.000667 0.000505 0.000222 0.000186

TMHMM  Annotations      download full data without filtering help

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