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CAZyme Information: MGYG000004856_02762
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Raoultibacter timonensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Eggerthellaceae; Raoultibacter; Raoultibacter timonensis | |||||||||||
| CAZyme ID | MGYG000004856_02762 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1829; End: 3175 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH73 | 286 | 426 | 8.2e-25 | 0.9609375 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4193 | LytD | 1.12e-56 | 225 | 448 | 54 | 245 | Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]. |
| smart00047 | LYZ2 | 4.76e-24 | 280 | 429 | 7 | 141 | Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes. |
| pfam01832 | Glucosaminidase | 1.83e-10 | 286 | 362 | 1 | 74 | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan. |
| pfam04122 | CW_binding_2 | 1.94e-09 | 91 | 181 | 1 | 80 | Putative cell wall binding repeat 2. This repeat is found in multiple tandem copies in proteins including amidase enhancers and adhesins. |
| COG2247 | LytB | 3.02e-05 | 9 | 105 | 38 | 119 | Putative cell wall-binding domain [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QOS67179.1 | 5.27e-111 | 9 | 447 | 303 | 714 |
| QKF06896.1 | 1.38e-94 | 3 | 448 | 262 | 698 |
| BCA89043.1 | 1.16e-49 | 183 | 448 | 787 | 1048 |
| BCS56855.1 | 5.50e-49 | 183 | 448 | 811 | 1072 |
| ARC83197.1 | 1.73e-37 | 194 | 447 | 143 | 387 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6FXP_A | 2.88e-31 | 226 | 428 | 53 | 230 | ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50] |
| 6U0O_B | 1.05e-30 | 226 | 428 | 83 | 260 | ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325] |
| 6FXO_A | 7.81e-29 | 282 | 448 | 88 | 244 | ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI7_A | 1.02e-28 | 282 | 441 | 80 | 223 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI8_A | 7.08e-28 | 282 | 441 | 80 | 223 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O33635 | 2.21e-26 | 282 | 448 | 1179 | 1335 | Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1 |
| Q5HQB9 | 2.21e-26 | 282 | 448 | 1179 | 1335 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1 |
| P39848 | 2.45e-26 | 226 | 448 | 686 | 880 | Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1 |
| Q8CPQ1 | 3.97e-26 | 282 | 448 | 1179 | 1335 | Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1 |
| Q8NX96 | 5.21e-26 | 282 | 448 | 1100 | 1256 | Bifunctional autolysin OS=Staphylococcus aureus (strain MW2) OX=196620 GN=atl PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.999770 | 0.000227 | 0.000026 | 0.000001 | 0.000000 | 0.000005 |