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CAZyme Information: MGYG000004866_01500
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Gemmiger variabilis_B | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Gemmiger; Gemmiger variabilis_B | |||||||||||
| CAZyme ID | MGYG000004866_01500 | |||||||||||
| CAZy Family | GH2 | |||||||||||
| CAZyme Description | Beta-galactosidase | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 38139; End: 40511 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH2 | 4 | 523 | 2.4e-102 | 0.6117021276595744 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG3250 | LacZ | 2.61e-67 | 41 | 769 | 53 | 763 | Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism]. |
| PRK10150 | PRK10150 | 1.49e-48 | 55 | 401 | 69 | 451 | beta-D-glucuronidase; Provisional |
| PRK10340 | ebgA | 2.53e-41 | 41 | 393 | 88 | 470 | cryptic beta-D-galactosidase subunit alpha; Reviewed |
| PRK09525 | lacZ | 1.20e-28 | 2 | 372 | 52 | 463 | beta-galactosidase. |
| pfam02836 | Glyco_hydro_2_C | 1.55e-22 | 258 | 522 | 8 | 293 | Glycosyl hydrolases family 2, TIM barrel domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AXB28859.1 | 0.0 | 1 | 790 | 1 | 793 |
| ATL89252.1 | 0.0 | 1 | 790 | 1 | 793 |
| ATO98959.1 | 0.0 | 1 | 790 | 1 | 793 |
| QIA42639.1 | 0.0 | 1 | 790 | 1 | 793 |
| CBL02555.1 | 0.0 | 1 | 790 | 1 | 793 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5EUV_A | 6.42e-155 | 5 | 781 | 7 | 730 | ChainA, Beta-D-galactosidase [Paracoccus sp. 32d],5EUV_B Chain B, Beta-D-galactosidase [Paracoccus sp. 32d],5LDR_B Chain B, Beta-D-galactosidase [Paracoccus sp. 32d] |
| 5LDR_A | 6.61e-155 | 5 | 781 | 8 | 731 | ChainA, Beta-D-galactosidase [Paracoccus sp. 32d] |
| 6ED1_A | 3.22e-49 | 2 | 565 | 34 | 642 | ChainA, Glycosyl hydrolase family 2, sugar binding domain protein [Phocaeicola dorei],6ED1_B Chain B, Glycosyl hydrolase family 2, sugar binding domain protein [Phocaeicola dorei],6ED1_C Chain C, Glycosyl hydrolase family 2, sugar binding domain protein [Phocaeicola dorei],6ED1_D Chain D, Glycosyl hydrolase family 2, sugar binding domain protein [Phocaeicola dorei] |
| 5UJ6_A | 6.40e-47 | 4 | 586 | 29 | 671 | CrystalStructure of Bacteroides Uniformis beta-glucuronidase [Bacteroides uniformis str. 3978 T3 ii],5UJ6_B Crystal Structure of Bacteroides Uniformis beta-glucuronidase [Bacteroides uniformis str. 3978 T3 ii],6NZG_A Bacteroides uniformis beta-glucuronidase 2 covalently bound to cyclophellitol-6-carboxylate aziridine [Bacteroides uniformis],6NZG_B Bacteroides uniformis beta-glucuronidase 2 covalently bound to cyclophellitol-6-carboxylate aziridine [Bacteroides uniformis] |
| 6D50_A | 6.65e-47 | 4 | 586 | 37 | 679 | Bacteroidesuniforms beta-glucuronidase 2 bound to D-glucaro-1,5-lactone [Bacteroides uniformis str. 3978 T3 ii],6D50_B Bacteroides uniforms beta-glucuronidase 2 bound to D-glucaro-1,5-lactone [Bacteroides uniformis str. 3978 T3 ii] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P26257 | 5.61e-165 | 7 | 588 | 9 | 612 | Beta-galactosidase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=lacZ PE=1 SV=1 |
| P77989 | 5.46e-146 | 27 | 761 | 32 | 717 | Beta-galactosidase OS=Thermoanaerobacter pseudethanolicus (strain ATCC 33223 / 39E) OX=340099 GN=lacZ PE=3 SV=2 |
| Q59750 | 1.04e-82 | 11 | 588 | 7 | 612 | Beta-galactosidase OS=Rhizobium meliloti OX=382 GN=lacZ PE=1 SV=1 |
| T2KPJ7 | 7.22e-60 | 2 | 565 | 53 | 668 | Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_21970 PE=2 SV=1 |
| T2KM09 | 6.01e-31 | 55 | 567 | 110 | 662 | Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22050 PE=2 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000068 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |