CAZyme Information: MGYG000004869_03686

Basic Information

• Species: Lactonifactor sp009677585
• Lineage: Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lactonifactor; Lactonifactor sp009677585
• CAZyme ID: MGYG000004869_03686
• CAZy Family: CBM6
• CAZyme Description: hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
2025	MGYG000004869_55|CGC4	222747.15	4.166

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004869	4923116	Isolate	United States	North America

• Gene Location: Start: 117687; End: 123764 Strand: +

Full Sequence      

MKICKKLVSCLLTAVLALTALAPMSVAAEPGDEQGFQIVVGKAATDMQDYAAKELQKYLY
QLSGTHVPIVTETEGMELTNAFVLGTLEANSQIGAVKEELESIAGTGAEGHEGEQGYVLK
KAGSTLYIGGTDDEGALYGVYGLLDDYYGIGFYFSGDVIPEEKTALYMPEVEEAKTPRQY
MRGVLPWTNFPQSATVYSTEDWMHIIDQMARMRMNFLNIHNYNGELGHNEMYHNFTYNGY
TSRNWNPTAKSGHSWGGPGWDVNQYLFGASDLFDDYDFGSDSAIHNDNLSNEENFAKGSS
QFQMVINYAHTRGVKMGLGLDINLIPEGYGAEAKDPGVIKARTDQIMEDYKDLDVLLLYL
SENVGQSESTLNYWKECFNGFYSAMKEGQPETQLAISGWGVRADIAAYVPDDVIVAPIAD
YSAGFVNGEKVYGGNKEFWGGPWVERDFDSSVYFYPFNMGLDQTIASYQENKDSMQGMFT
LTWRLTDGVDAKISYVAKAPWDREERYGTEESVYREYAEKCYGDSAADDMTKLIYADEKT
VVPTLWSECRSTPGFTNGDRSADVEKVQGMIDRVDAAIAGSSDRGCIERLEKLRSRLVCA
QYYCKLDQSFNSTPWENLQDDFSVWAQSFTNRVDDISSLGNVQSSQNRFVQLRYVGRETS
LRNEQAIKAPMNVTARGTTDGAALTWTYEADSAEGFLVYRDGEKITENPLGGDVREFTDT
YDGEAAYTVTAVTEEGEGEASIPQTCEAGAADQTAPKPIVVSPPTSVRAGQDMALKVRIL
DERNYDELSAAIHYRAMGSGESFAEIPMEHRVKGTFAANVPTSGFADSGIEYFISVSDGT
NAEVWPATAGEEGLNAVCTVYTDGDSASVLRAPSNIAEEDGNVVWNDAGGDVFWYKIYRG
DTPDFTPSGATYVTYVEKGTTSFKDVSTDFNGTRLSEKTSYYRVTAVDRHLNESIPTMAV
QVGSPLPDPLSNTLFADADQLYKSRVTPQAGSSTGSIVGYTEEGGYALFKQLPFSKTVVC
NSVEVTYAASGAGAMLEIHGGAPDGELLGEANLPGTGGWGTFTTVTIPVDLGEGGTRDIY
FVYRGGYNLDYFRFSATPEPSQDDIIINTKDMMAFRSDAKSDMKGTASEISGFGNEGDRI
ALGKGYYVNDTEHASASGATGPLPGYGMDCFFFGHTAIPTAWVQFSNLPTGKAWFAYDKG
YTAPEHKLGVYVNNSKTSDIALHGSSGSNWDSGTFKIMYADTGVTLADGDTIKIQNDVAC
PANGIKLFVENPYFAKQMDITYSNNADTRYSLYVNGEKQESITLSNSDGRKKICSVPVTV
EEGLIELVAEEEDIAANHNARSTIYKMVLCKEAKTLTRTITVTAGQGGTVTAENGEIAED
GTITVPYGDSQRFDFHPEDGYGVEKVLVNGADYGQRSSYTFENLNYDATLEVTFSQNMTV
SEYNINIGDTPGGKITSDFAKAQKNQPVTLKVQADEGYHYAAGTLRYTSASQPDGVAVSD
ASTQFSMPGEDVTVTAEFVENDPILLDSITLDGLEKTEYEIGEELDLAGLTVTAHYSDGS
SAQVTEYETSGFDSETAGEKTVTVSYTEGELTKTADFKVTVKERVLTGITVVPPAKTEYE
VGEPFDSTGMEVTAEYSNGDSEAVEEYAVSEVDTCKPGEKKVMVTYQDQTAEFTIQVKEK
ILTGIEVIVPDKTDYLTGEAFDPTGMVVNAVYSNHVKEEIAPEEYTVDGFDSAEAGEKTI
TVTYQEMTADFTVNVTEEVEAPVLAKIVLTPPEKAEYKTGETVDTEGLAVYAHYSDGTYT
ELTAGSYQVTVPELTEAGIYYVTVTYEDMTAEYMIVAEEEPVNVPHWEEDRNGWWYNNGD
GTYPKSCWKLIADKWYYFDRYGYRMTGWVQDGQNWYYCDKDGIMQTGWLLDGTTWYYLKS
SGSMAAGWVQVGTTWYYMSRSGAMQTGWVQIEKTWYYLNKSGAMQTGWVKDGRTWYYLNN
NGAMAVGWVNISGKWYYLRENGGMASNTWIGKYYVNDSGVWTRTK

Enzyme Prediction     

No EC number prediction in MGYG000004869_03686.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
CBM6	986	1095	7.5e-18	0.782608695652174

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
NF033930	pneumo_PspA	5.08e-56	1838	2019	434	619	pneumococcal surface protein A. The pneumococcal surface protein proteins, found in Streptococcus pneumoniae, are repetitive, with patterns of localized high sequence identity across pairs of proteins given different specific names that recombination may be presumed. This protein, PspA, has an N-terminal region that lacks a cross-wall-targeting YSIRK type extended signal peptide, in contrast to the closely related choline-binding protein CbpA which has a similar C-terminus but a YSIRK-containing region at the N-terminus.
NF033930	pneumo_PspA	1.24e-55	1847	2021	485	659	pneumococcal surface protein A. The pneumococcal surface protein proteins, found in Streptococcus pneumoniae, are repetitive, with patterns of localized high sequence identity across pairs of proteins given different specific names that recombination may be presumed. This protein, PspA, has an N-terminal region that lacks a cross-wall-targeting YSIRK type extended signal peptide, in contrast to the closely related choline-binding protein CbpA which has a similar C-terminus but a YSIRK-containing region at the N-terminus.
NF033930	pneumo_PspA	1.40e-53	1847	2019	465	640	pneumococcal surface protein A. The pneumococcal surface protein proteins, found in Streptococcus pneumoniae, are repetitive, with patterns of localized high sequence identity across pairs of proteins given different specific names that recombination may be presumed. This protein, PspA, has an N-terminal region that lacks a cross-wall-targeting YSIRK type extended signal peptide, in contrast to the closely related choline-binding protein CbpA which has a similar C-terminus but a YSIRK-containing region at the N-terminus.
NF033838	PspC_subgroup_1	1.30e-52	1761	2021	425	682	pneumococcal surface protein PspC, choline-binding form. The pneumococcal surface protein PspC, as described in Streptococcus pneumoniae, is a repetitive and highly variable protein, recognized by a conserved N-terminal domain and also by genomic location. This form, subgroup 1, has variable numbers of a choline-binding repeat in the C-terminal region, and is also known as choline-binding protein A. The other form, subgroup 2, is anchored covalently after cleavage by sortase at a C-terminal LPXTG site.
COG5263	COG5263	1.24e-51	1815	2021	101	312	Glucan-binding domain (YG repeat) [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QKH85008.1	1.01e-201	37	962	24	1069
QCQ35918.1	1.41e-201	37	962	24	1069
QCQ31638.1	1.41e-201	37	962	24	1069
QCQ49301.1	1.95e-201	37	962	24	1069
QTO27335.1	1.95e-201	37	962	24	1069

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1W9S_A	5.22e-12	995	1096	37	140	ChainA, Bh0236 Protein [Halalkalibacterium halodurans],1W9S_B Chain B, Bh0236 Protein [Halalkalibacterium halodurans],1W9T_A Chain A, Bh0236 Protein [Halalkalibacterium halodurans],1W9T_B Chain B, Bh0236 Protein [Halalkalibacterium halodurans],1W9W_A Chain A, Bh0236 Protein [Halalkalibacterium halodurans]
2V4V_A	6.36e-09	983	1095	15	128	CrystalStructure of a Family 6 Carbohydrate-Binding Module from Clostridium cellulolyticum in complex with xylose [Ruminiclostridium cellulolyticum]
5FUI_A	1.78e-06	972	1095	9	131	Crystalstructure of the C-terminal CBM6 of LamC a marine laminarianse from Zobellia galactanivorans [Zobellia galactanivorans]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
A0A401ETL2	6.68e-10	1439	1694	1211	1469	Exo-beta-1,6-galactobiohydrolase OS=Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 / JCM 1217 / NCTC 11818 / E194b) OX=565042 GN=bl1,6Gal PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000246	0.999027	0.000178	0.000187	0.000175	0.000150

TMHMM  Annotations     

start	end
7	26