dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000004871_01515

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Basic Information help

Species

Lineage

Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Muribaculaceae; CAG-485;

CAZyme ID

MGYG000004871_01515

CAZy Family

CBM13

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
843		93136.7	4.7312

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004871	2408616	MAG	Chile	South America

Gene Location

Start: 2873; End: 5404 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000004871_01515.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
CBM13	387	538	1.4e-20	0.7553191489361702
GH5	628	764	7e-19	0.9716312056737588

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam14200	RicinB_lectin_2	1.04e-16	424	512	2	89	Ricin-type beta-trefoil lectin domain-like.
pfam14200	RicinB_lectin_2	1.71e-16	387	465	13	89	Ricin-type beta-trefoil lectin domain-like.
pfam14200	RicinB_lectin_2	8.68e-16	662	751	1	89	Ricin-type beta-trefoil lectin domain-like.
pfam14200	RicinB_lectin_2	1.33e-14	625	704	12	89	Ricin-type beta-trefoil lectin domain-like.
pfam14200	RicinB_lectin_2	1.07e-10	471	527	1	57	Ricin-type beta-trefoil lectin domain-like.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ACU61780.1	6.99e-128	8	452	10	451
QHS59416.1	3.21e-127	1	457	1	454
BCJ98993.1	4.24e-58	1	308	5	291
AWV08387.1	1.13e-53	15	288	8	284
QNN78011.1	2.73e-53	6	291	12	300

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
3SNZ_A	2.48e-18	536	625	7	96	Crystalstructure of a mutant W39D of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052]
3SO1_A	8.60e-18	536	625	7	96	Crystalstructure of a double mutant T41S T82S of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052],3SO1_B Crystal structure of a double mutant T41S T82S of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052],3SO1_C Crystal structure of a double mutant T41S T82S of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052],3SO1_D Crystal structure of a double mutant T41S T82S of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052],3SO1_E Crystal structure of a double mutant T41S T82S of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052],3SO1_F Crystal structure of a double mutant T41S T82S of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052],3SO1_G Crystal structure of a double mutant T41S T82S of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052],3SO1_H Crystal structure of a double mutant T41S T82S of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052]
3SO0_A	2.19e-17	536	625	7	96	Crystalstructure of a mutant T41S of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052],3SO0_B Crystal structure of a mutant T41S of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052],3SO0_C Crystal structure of a mutant T41S of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052],3SO0_D Crystal structure of a mutant T41S of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052],3SO0_E Crystal structure of a mutant T41S of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052],3SO0_F Crystal structure of a mutant T41S of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052],3SO0_G Crystal structure of a mutant T41S of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052],3SO0_H Crystal structure of a mutant T41S of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052]
3SNY_A	1.04e-16	536	625	7	96	Crystalstructure of a mutant T82R of a betagamma-crystallin domain from Clostridium beijerinckii [Clostridium beijerinckii NCIMB 8052]
3HZB_A	1.16e-16	536	620	4	88	Crystalstructure of a betagamma-crystallin domain from Flavobacterium johnsoniae [Flavobacterium johnsoniae UW101],3HZB_B Crystal structure of a betagamma-crystallin domain from Flavobacterium johnsoniae [Flavobacterium johnsoniae UW101],3HZB_C Crystal structure of a betagamma-crystallin domain from Flavobacterium johnsoniae [Flavobacterium johnsoniae UW101],3HZB_D Crystal structure of a betagamma-crystallin domain from Flavobacterium johnsoniae [Flavobacterium johnsoniae UW101],3HZB_E Crystal structure of a betagamma-crystallin domain from Flavobacterium johnsoniae [Flavobacterium johnsoniae UW101],3HZB_F Crystal structure of a betagamma-crystallin domain from Flavobacterium johnsoniae [Flavobacterium johnsoniae UW101],3HZB_G Crystal structure of a betagamma-crystallin domain from Flavobacterium johnsoniae [Flavobacterium johnsoniae UW101],3HZB_H Crystal structure of a betagamma-crystallin domain from Flavobacterium johnsoniae [Flavobacterium johnsoniae UW101]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P02967	3.49e-06	533	618	2	86	Development-specific protein S homolog OS=Myxococcus xanthus OX=34 GN=ops PE=3 SV=1
P02966	6.20e-06	533	618	2	86	Development-specific protein S OS=Myxococcus xanthus OX=34 GN=tps PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000286	0.999048	0.000193	0.000161	0.000150	0.000144

TMHMM Annotations help

There is no transmembrane helices in MGYG000004871_01515.