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CAZyme Information: MGYG000004876_00306

You are here: Home > Sequence: MGYG000004876_00306

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides;
CAZyme ID MGYG000004876_00306
CAZy Family GH105
CAZyme Description Unsaturated rhamnogalacturonyl hydrolase YteR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
367 MGYG000004876_2|CGC5 42944.4 7.8469
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004876 4781463 MAG China Asia
Gene Location Start: 144644;  End: 145747  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004876_00306.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 57 364 1.1e-74 0.9548192771084337

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07470 Glyco_hydro_88 1.68e-50 59 362 29 337
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225 YesR 8.37e-43 59 358 36 347
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT89086.1 4.43e-274 1 367 1 367
ALJ59889.1 4.43e-274 1 367 1 367
QDO68160.1 5.17e-273 1 367 1 367
BCA52191.1 7.16e-216 1 367 1 367
QUT73021.1 7.16e-216 1 367 1 367

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3K11_A 2.93e-35 162 359 199 405
Crystalstructure of Putative glycosyl hydrolase (NP_813087.1) from BACTEROIDES THETAIOTAOMICRON VPI-5482 at 1.80 A resolution [Bacteroides thetaiotaomicron VPI-5482]
1NC5_A 3.77e-28 31 358 28 358
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 1.61e-27 31 358 18 348
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]
5NOA_A 2.03e-23 106 312 110 321
PolysaccharideLyase BACCELL_00875 [Bacteroides thetaiotaomicron]
4Q88_A 3.18e-21 163 312 141 304
ChainA, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482],4Q88_B Chain B, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O34559 2.06e-27 31 358 28 358
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1
O31521 1.54e-18 65 349 31 324
Unsaturated rhamnogalacturonyl hydrolase YesR OS=Bacillus subtilis (strain 168) OX=224308 GN=yesR PE=1 SV=1
T2KPL9 7.19e-18 200 325 219 339
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22220 PE=2 SV=1
L7P9J4 2.42e-17 124 325 131 340
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Nonlabens ulvanivorans OX=906888 GN=IL45_01505 PE=1 SV=1
P9WF04 3.66e-15 163 325 201 375
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_28 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000228 0.999194 0.000158 0.000140 0.000132 0.000129

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004876_00306.