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CAZyme Information: MGYG000004876_01271

You are here: Home > Sequence: MGYG000004876_01271

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides;
CAZyme ID MGYG000004876_01271
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
540 MGYG000004876_11|CGC1 61109.99 5.9121
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004876 4781463 MAG China Asia
Gene Location Start: 24766;  End: 26388  Strand: +

Full Sequence      Download help

MRNNKYLQIL  SICTLFSVTA  CSSKLEIPEP  PVYNKVRNIT  VDLNQEMQTI  DGFGASDAWR60
CQMVGKYWPE  EKRNQIADWL  FSREVDENGN  PKGIGLSMWR  FYIGAGSTEQ  GLDSDIADEW120
RRSECFLSAD  GTYNWNKYEG  QKWFLKAARD  RGVERFLAFN  LSAPVHMSIN  GKGFSIKEKR180
MNIKAGMMPD  YADFLVECID  NLQKKEGVKF  DYLSPVNEPQ  WDWSKGSQEG  TPATNEEISQ240
FVKLLSERLS  KRGLTTKIAL  GEAGSIQYLY  KNVDNENFDN  QIDDFWNPSS  PLSIASLPNV300
ERVMTGHSYW  TVWPVKDLVS  HRKALNDKIK  EYSGLKYWQT  EYSILESPGE  SEIPNGNGNK360
RDLGMQTALF  VARTIHNDLT  LVNASSWSWW  TALTRADYKD  GLVYLDDGTN  NGSQATDYCK420
KDGFARDSKL  MWMLGNYSFF  VRPGMKRIAV  VTENPDPEKE  GKDVMISAYK  DGSSQKIVLV480
AVNVGSVNRK  YNLQDLKLKN  QTLTPYTTSE  TSNLGKGAAI  KTNEIVVPAK  SVVTFVGELE540
540

Enzyme Prediction      help

No EC number prediction in MGYG000004876_01271.

CAZyme Signature Domains help

Created with Snap27548110813516218921624327029732435137840543245948651338536GH30
Family Start End Evalue family coverage
GH30 38 536 1.3e-203 0.9958677685950413

CDD Domains      download full data without filtering help

Created with Snap27548110813516218921624327029732435137840543245948651339404Glyco_hydr_30_27540XynC444535Glyco_hydro_30C
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam14587 Glyco_hydr_30_2 5.44e-173 39 404 4 367
O-Glycosyl hydrolase family 30.
COG5520 XynC 5.71e-19 7 540 3 431
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam17189 Glyco_hydro_30C 0.010 444 535 1 63
Glycosyl hydrolase family 30 beta sandwich domain.

CAZyme Hits      help

Created with Snap2754811081351621892162432702973243513784054324594865131540QDO68591.1|GH30_41540QUT88592.1|GH30_41540ALJ60402.1|GH30_420540SCD20877.1|GH30_45537APA00119.1|GH30_4
Hit ID E-Value Query Start Query End Hit Start Hit End
QDO68591.1 0.0 1 540 1 540
QUT88592.1 0.0 1 540 1 540
ALJ60402.1 0.0 1 540 1 540
SCD20877.1 1.12e-272 20 540 19 543
APA00119.1 7.97e-237 5 537 2 539

PDB Hits      download full data without filtering help

Created with Snap275481108135162189216243270297324351378405432459486513415383CLW_A395366M5Z_A394507O0E_A395406IUJ_A395406KRL_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
3CLW_A 1.22e-103 41 538 10 497
Crystalstructure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_B Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_C Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_D Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_E Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343],3CLW_F Crystal structure of conserved exported protein from Bacteroides fragilis [Bacteroides fragilis NCTC 9343]
6M5Z_A 3.30e-18 39 536 25 452
ChainA, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612],6M5Z_B Chain B, GH30 Xylanase C [Talaromyces cellulolyticus CF-2612]
7O0E_A 4.30e-16 39 450 5 361
ChainA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464],7O0E_G Chain G, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]
6IUJ_A 8.38e-16 39 540 24 474
ChainA, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612],6IUJ_B Chain B, GH30 Xylanase B [Talaromyces cellulolyticus CF-2612]
6KRL_A 1.05e-15 39 540 95 545
Crystalstructure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris [Saccharomyces uvarum],6KRN_A Crystal structure of GH30 xylanase B from Talaromyces cellulolyticus expressed by Pichia pastoris in complex with aldotriuronic acid [Saccharomyces uvarum]

Swiss-Prot Hits      download full data without filtering help

Created with Snap27548110813516218921624327029732435137840543245948651339450sp|G2Q1N4|XY30A_MYCTT
Hit ID E-Value Query Start Query End Hit Start Hit End Description
G2Q1N4 4.73e-16 39 450 29 385
GH30 family xylanase OS=Myceliophthora thermophila (strain ATCC 42464 / BCRC 31852 / DSM 1799) OX=573729 GN=Xyn30A PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000000 0.000004 1.000040 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004876_01271.