logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004876_01274

You are here: Home > Sequence: MGYG000004876_01274

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides;
CAZyme ID MGYG000004876_01274
CAZy Family GH2
CAZyme Description Beta-galactosidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
912 MGYG000004876_11|CGC1 104004.57 5.7292
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004876 4781463 MAG China Asia
Gene Location Start: 30219;  End: 32957  Strand: +

Full Sequence      Download help

MSSCKQSMQE  IDLSGEWEVA  LDSLDKGISE  RWYIESFSDR  ILLPGTLCDA  GYGTPCTLKP60
VMEKEIFLNL  KRKFDYLGPA  WYRKEISVPR  EWKDKDVILT  LERVIWNSQV  WINGTQVARA120
NESLTTPHYF  NLGKYLVPGE  NNVIAIRIDN  RRQHDISVRN  LAHAYTNDTQ  TMWNGILGKI180
ALTAKDKVRI  EELRLTPNID  NQTVNVTVKI  GSDGTALASG  KLRLSVKDPK  GNKLPEKEIK240
INSMETTFDY  PVKDAMLWDE  FSPNIYEATA  TLEVGNMTDS  RSETFGMRKL  TNKEALLQIN300
DRRLFLRGTL  ECCIFPLKGY  PPMDNTGWEK  VFNAARNYGL  NHIRFHSWCP  PEAAFDVADQ360
MGFYLQIELP  LWALNVGEDQ  KTVDFLYDEA  DRIMKEYGNH  PSFCFWSLGN  ELQGDFNVMD420
KLLTTIKQED  KRHLYMTTTF  TFESGHGSWP  ESNDDFWVTQ  WTKNGWVRGQ  GIFDDQPASF480
NKDFSTAIEG  LPVPLITHEI  GQYSVFPNLK  EIDKYTGNLL  PLNFKAVAKD  LEKKGRLHLA540
EANLMASGKL  AAILYKEEIE  RALKTPGFSG  FQLLDLHDFP  GQGTALVGII  DAFWESKGLI600
TPEEFRQFCS  PVVPLARFEK  ATYANNETFK  AQFEVANFSN  KVLSDIQPEW  ALKDSKGTTI660
AEGKLEKQEV  AIGNALKLGN  VSIPLKPIAK  ADRLTLSIQF  AGTDYRNSWN  IWVYPQELPE720
VGNEIIYTRS  FADAEKALNQ  GKKVLLNPVQ  EDINGLEGKF  VQVFWSPVHF  PNQPGTMGIL780
CDPAHPALAD  FPTEMHSNWQ  WWDICKNATT  MELDSLKNNM  QPIIRMVDNF  YKNRNLGLLF840
EAKVGNGKLL  VCSSDLIKDL  DSRPVSRQLR  YSLLKYMENS  AFHPEEELSF  EQIKKILHNV900
NKKKEEKKSI  YE912

Enzyme Prediction      help

No EC number prediction in MGYG000004876_01274.

CAZyme Signature Domains help

Created with Snap45911361822282733193644104565015475926386847297758208665700GH2
Family Start End Evalue family coverage
GH2 5 700 9.4e-77 0.723404255319149

CDD Domains      download full data without filtering help

Created with Snap45911361822282733193644104565015475926386847297758208667445LacZ82411ebgA6411PRK1015013175Glyco_hydro_2_N188288Glyco_hydro_2
Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3250 LacZ 1.01e-29 7 445 9 444
Beta-galactosidase/beta-glucuronidase [Carbohydrate transport and metabolism].
PRK10340 ebgA 7.39e-19 82 411 113 449
cryptic beta-D-galactosidase subunit alpha; Reviewed
PRK10150 PRK10150 1.13e-18 6 411 8 417
beta-D-glucuronidase; Provisional
pfam02837 Glyco_hydro_2_N 1.56e-12 13 175 4 156
Glycosyl hydrolases family 2, sugar binding domain. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities and has a jelly-roll fold. The domain binds the sugar moiety during the sugar-hydrolysis reaction.
pfam00703 Glyco_hydro_2 9.16e-12 188 288 1 106
Glycosyl hydrolases family 2. This family contains beta-galactosidase, beta-mannosidase and beta-glucuronidase activities.

CAZyme Hits      help

Created with Snap45911361822282733193644104565015475926386847297758208661912QUT88596.1|GH21912ALJ60397.1|GH21912QDO68585.1|GH22899SCD20869.1|GH211911APA00996.1|GH2
Hit ID E-Value Query Start Query End Hit Start Hit End
QUT88596.1 0.0 1 912 17 928
ALJ60397.1 0.0 1 912 17 928
QDO68585.1 0.0 1 912 17 928
SCD20869.1 0.0 2 899 23 916
APA00996.1 0.0 11 911 27 931

PDB Hits      download full data without filtering help

Created with Snap4591136182228273319364410456501547592638684729775820866114446SD0_A114446S6Z_A124116XXW_A1104116ETZ_A1104116ZJQ_A
Hit ID E-Value Query Start Query End Hit Start Hit End Description
6SD0_A 1.19e-24 11 444 40 475
Structureof beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_B Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_C Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8],6SD0_D Structure of beta-galactosidase from Thermotoga maritima. [Thermotoga maritima MSB8]
6S6Z_A 1.19e-24 11 444 39 474
Structureof beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_B Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_C Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_D Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_E Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_F Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_G Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8],6S6Z_H Structure of beta-Galactosidase from Thermotoga maritima [Thermotoga maritima MSB8]
6XXW_A 4.00e-18 12 411 34 416
Structureof beta-D-Glucuronidase for Dictyoglomus thermophilum. [Dictyoglomus thermophilum H-6-12]
6ETZ_A 5.35e-16 110 411 137 420
Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB [Arthrobacter sp. 32cB],6H1P_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB - data collected at room temperature [Arthrobacter sp. 32cB]
6ZJQ_A 5.42e-16 110 411 160 443
Cold-adaptedbeta-D-galactosidase from Arthrobacter sp. 32cB mutant E517Q in complex with galactose [Arthrobacter sp. 32cB],6ZJR_A Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB mutant E517Q in complex with lactulose [Arthrobacter sp. 32cB]

Swiss-Prot Hits      download full data without filtering help

Created with Snap459113618222827331936441045650154759263868472977582086611444sp|Q56307|BGAL_THEMA5434sp|O52847|BGAL_PRIM39411sp|Q6LL68|BGAL_PHOPR68434sp|Q48846|BGAL_LATSK13430sp|Q04F24|BGAL_OENOB
Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q56307 6.51e-24 11 444 40 475
Beta-galactosidase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=lacZ PE=1 SV=2
O52847 2.10e-19 5 434 53 503
Beta-galactosidase OS=Priestia megaterium (strain DSM 319 / IMG 1521) OX=592022 GN=bgaM PE=3 SV=1
Q6LL68 1.27e-17 9 411 45 456
Beta-galactosidase OS=Photobacterium profundum (strain SS9) OX=298386 GN=lacZ PE=3 SV=1
Q48846 8.66e-16 68 434 119 487
Beta-galactosidase large subunit OS=Latilactobacillus sakei OX=1599 GN=lacL PE=3 SV=1
Q04F24 2.03e-14 13 430 50 475
Beta-galactosidase OS=Oenococcus oeni (strain ATCC BAA-331 / PSU-1) OX=203123 GN=lacZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000053 0.000020 0.000001 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004876_01274.