CAZyme Information: MGYG000004876_01445

Basic Information

• Lineage: Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides
• CAZyme ID: MGYG000004876_01445
• CAZy Family: GH105
• CAZyme Description: Unsaturated rhamnogalacturonyl hydrolase YesR

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
371		42690.05	7.1148

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004876	4781463	MAG	China	Asia

• Gene Location: Start: 62429; End: 63544 Strand: +

Full Sequence      

MKKPFLLIFFFQITVMQVVGQQHFDKTAIKSIMKRVADWQIANPNKGAEHDDLDWTHAAL
YMGMLDWAELAEKEDGDDSYYQWLLRIGRRNHFQVGKWMYHADFIAVGQPFIDLYNKYGN
KKMIAPVMARANWIIENPAETTLELDYGKLETLDRWSWCDALFMAPPVYAKLYALTKDKK
YLDFLNKEYKATYDYLYDKEEHLFYRDRRYFAKREANGKKVFWGRGNGWVLGGLAEILQV
LPQTEPSRAFYQDLFVTLATRVAGLQSPDGYWHASLLDPVSYPSPETSATGFIIYAFAYG
VNEGLLDKKTFIPVIEKGWQALVDAVEPTGKLGYVQPIGADPRKVTRDMTEVYGVGAFLL
SGCQIYKMAGK

Enzyme Prediction     

No EC number prediction in MGYG000004876_01445.

CAZyme Signature Domains

Family	Start	End	Evalue	family coverage
GH105	48	366	9.8e-86	0.9728915662650602

CDD Domains     

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
pfam07470	Glyco_hydro_88	1.36e-100	32	368	1	342	Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225	YesR	9.67e-51	24	360	11	348	Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
ALJ59360.1	2.48e-252	1	368	1	368
QUT89583.1	2.48e-252	1	368	1	368
AVM53966.1	3.38e-236	1	371	1	368
QDO67620.1	1.39e-229	22	368	24	370
ALJ58171.1	5.03e-199	20	368	19	367

PDB Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
4CE7_A	7.77e-70	24	368	24	369	Crystalstructure of a novel unsaturated beta-glucuronyl hydrolase enzyme, belonging to family GH105, involved in ulvan degradation [Nonlabens ulvanivorans],4CE7_B Crystal structure of a novel unsaturated beta-glucuronyl hydrolase enzyme, belonging to family GH105, involved in ulvan degradation [Nonlabens ulvanivorans],4CE7_C Crystal structure of a novel unsaturated beta-glucuronyl hydrolase enzyme, belonging to family GH105, involved in ulvan degradation [Nonlabens ulvanivorans]
5NOA_A	7.36e-63	39	364	44	370	PolysaccharideLyase BACCELL_00875 [Bacteroides thetaiotaomicron]
4Q88_A	3.68e-52	65	364	65	353	ChainA, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482],4Q88_B Chain B, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482]
1NC5_A	9.56e-11	158	371	141	373	Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A	3.91e-10	158	371	131	363	ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]

Swiss-Prot Hits     

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
T2KPL9	2.69e-72	16	368	21	375	Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22220 PE=2 SV=1
L7P9J4	5.17e-69	24	368	31	376	Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Nonlabens ulvanivorans OX=906888 GN=IL45_01505 PE=1 SV=1
P9WF04	9.79e-69	22	365	51	408	Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_28 PE=1 SV=1
O34559	5.23e-10	158	371	141	373	Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1

SignalP and Lipop Annotations

This protein is predicted as SP

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
0.000470	0.998802	0.000180	0.000177	0.000171	0.000160

TMHMM  Annotations     

There is no transmembrane helices in MGYG000004876_01445.