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CAZyme Information: MGYG000004876_02268

You are here: Home > Sequence: MGYG000004876_02268

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides;
CAZyme ID MGYG000004876_02268
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
956 MGYG000004876_28|CGC1 107189.83 6.5132
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004876 4781463 MAG China Asia
Gene Location Start: 12851;  End: 15721  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.174

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 25 950 1e-286 0.991504854368932

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 2.89e-62 31 717 6 866
alpha-L-rhamnosidase.
cd03143 A4_beta-galactosidase_middle_domain 0.008 576 655 53 135
A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. A4 beta-galactosidase middle domain: a type 1 glutamine amidotransferase (GATase1)-like domain. This group includes proteins similar to beta-galactosidase from Thermus thermophilus. Beta-Galactosidase hydrolyzes the beta-1,4-D-galactosidic linkage of lactose, as well as those of related chromogens, o-nitrophenyl-beta-D-galactopyranoside (ONP-Gal) and 5-bromo-4-chloro-3-indolyl-beta-D-galactoside (X-gal). This A4 beta-galactosidase middle domain lacks the catalytic triad of typical GATase1 domains. The reactive Cys residue found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow in typical GATase1 domains is not conserved in this group.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT89606.1 0.0 1 956 1 942
ALJ59333.1 0.0 1 956 1 942
QDO67792.1 0.0 1 956 1 942
QUT73830.1 0.0 1 956 8 920
QIK58423.1 0.0 2 952 3 919

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MQM_A 6.94e-46 31 947 41 1096
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 1.61e-45 31 947 41 1096
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]
6Q2F_A 2.33e-41 185 950 414 1139
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 1.88e-54 31 743 40 736
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.003086 0.969097 0.026520 0.000578 0.000375 0.000314

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004876_02268.