logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000004876_02448

You are here: Home > Sequence: MGYG000004876_02448

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides;
CAZyme ID MGYG000004876_02448
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
588 MGYG000004876_33|CGC1 64529.47 5.6071
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004876 4781463 MAG China Asia
Gene Location Start: 1578;  End: 3344  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004876_02448.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 76 274 3.5e-77 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 1.05e-04 5 229 9 236
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 0.002 86 265 12 174
Amb_all domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QDO71075.1 0.0 1 588 1 588
ALJ58404.1 0.0 1 588 1 581
QUT90477.1 0.0 1 588 1 581
QUT77068.1 1.25e-266 19 585 22 575
ADY37155.1 2.99e-192 21 486 62 527

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 2.44e-48 25 483 22 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q2UB83 8.97e-48 25 483 22 414
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q0CLG7 3.30e-47 25 483 22 414
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
B0XMA2 4.66e-47 1 483 1 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
A1DPF0 8.93e-47 1 483 1 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000245 0.999056 0.000212 0.000166 0.000167 0.000148

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004876_02448.