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CAZyme Information: MGYG000004879_02125
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Clostridium_N; | |||||||||||
| CAZyme ID | MGYG000004879_02125 | |||||||||||
| CAZy Family | CE8 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 6038; End: 9655 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CE8 | 774 | 1060 | 5.6e-75 | 0.9479166666666666 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4677 | PemB | 4.61e-44 | 753 | 1064 | 81 | 404 | Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism]. |
| PLN02432 | PLN02432 | 5.39e-36 | 755 | 1037 | 13 | 258 | putative pectinesterase |
| pfam01095 | Pectinesterase | 1.76e-32 | 775 | 1059 | 12 | 292 | Pectinesterase. |
| PLN02671 | PLN02671 | 1.53e-28 | 777 | 1036 | 73 | 322 | pectinesterase |
| PLN02773 | PLN02773 | 3.92e-27 | 775 | 1056 | 17 | 290 | pectinesterase |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| ACR72234.1 | 0.0 | 1 | 1084 | 1 | 1087 |
| QEH70392.1 | 2.63e-152 | 289 | 1068 | 516 | 1281 |
| ADD62022.1 | 6.85e-143 | 278 | 1063 | 773 | 1550 |
| ACZ98653.1 | 1.55e-141 | 299 | 1063 | 117 | 868 |
| CED92996.1 | 2.18e-91 | 45 | 1067 | 35 | 1018 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 3UW0_A | 9.55e-33 | 748 | 1066 | 26 | 362 | Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081] |
| 2NSP_A | 6.47e-27 | 775 | 1065 | 18 | 337 | ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937] |
| 1QJV_A | 1.27e-22 | 775 | 1065 | 18 | 337 | ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi] |
| 2NTB_A | 1.27e-22 | 775 | 1065 | 18 | 337 | Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937] |
| 1XG2_A | 5.50e-21 | 770 | 1037 | 10 | 267 | ChainA, Pectinesterase 1 [Solanum lycopersicum] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q9FM79 | 7.48e-25 | 770 | 1036 | 87 | 343 | Pectinesterase QRT1 OS=Arabidopsis thaliana OX=3702 GN=QRT1 PE=1 SV=1 |
| Q9SIJ9 | 1.84e-22 | 775 | 1037 | 61 | 298 | Putative pectinesterase 11 OS=Arabidopsis thaliana OX=3702 GN=PME11 PE=3 SV=1 |
| Q84JX1 | 9.47e-22 | 770 | 1073 | 221 | 509 | Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana OX=3702 GN=PME19 PE=2 SV=1 |
| P0C1A9 | 1.01e-21 | 775 | 1065 | 42 | 361 | Pectinesterase A OS=Dickeya dadantii (strain 3937) OX=198628 GN=pemA PE=1 SV=1 |
| P0C1A8 | 1.36e-21 | 775 | 1065 | 42 | 361 | Pectinesterase A OS=Dickeya chrysanthemi OX=556 GN=pemA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000865 | 0.794986 | 0.203033 | 0.000475 | 0.000340 | 0.000257 |
