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CAZyme Information: MGYG000004879_02782

You are here: Home > Sequence: MGYG000004879_02782

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Clostridium_N;
CAZyme ID MGYG000004879_02782
CAZy Family CE8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2463 MGYG000004879_81|CGC1 264915.99 4.1564
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004879 3926800 MAG China Asia
Gene Location Start: 9105;  End: 16496  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004879_02782.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CE8 1364 1645 1.3e-75 0.9513888888888888
PL1 1788 2028 4.4e-39 0.8316831683168316

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4677 PemB 1.33e-35 1352 1634 87 389
Pectin methylesterase and related acyl-CoA thioesterases [Carbohydrate transport and metabolism, Lipid transport and metabolism].
pfam01095 Pectinesterase 4.97e-35 1366 1623 12 265
Pectinesterase.
PLN02432 PLN02432 6.85e-30 1366 1647 23 286
putative pectinesterase
PLN02990 PLN02990 1.10e-29 1366 1660 271 570
Probable pectinesterase/pectinesterase inhibitor
PLN02773 PLN02773 9.29e-29 1366 1623 17 269
pectinesterase

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADD62022.1 0.0 835 2340 725 2324
QEH70392.1 0.0 390 2126 100 1753
ACZ98653.1 0.0 844 2126 61 1348
ACR72234.1 9.89e-124 891 1665 294 1084
QJS18636.1 2.22e-85 1695 2126 243 673

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5GT5_A 6.43e-76 1693 2126 3 446
Structuralbasis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602 [Paenibacillus sp. 0602],5GT5_B Structural basis of the specific activity and thermostability of pectate lyase (pelN) from Paenibacillus sp. 0602 [Paenibacillus sp. 0602]
2NSP_A 1.32e-30 1341 1651 2 339
ChainA, Pectinesterase A [Dickeya dadantii 3937],2NSP_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NST_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NST_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT6_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT6_B Chain B, Pectinesterase A [Dickeya dadantii 3937],2NT9_A Chain A, Pectinesterase A [Dickeya dadantii 3937],2NT9_B Chain B, Pectinesterase A [Dickeya dadantii 3937]
3UW0_A 3.76e-27 1366 1634 44 345
Pectinmethylesterase from Yersinia enterocolitica [Yersinia enterocolitica subsp. enterocolitica 8081]
2NTB_A 3.71e-26 1341 1651 2 339
Crystalstructure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTB_B Crystal structure of pectin methylesterase in complex with hexasaccharide V [Dickeya dadantii 3937],2NTP_A Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTP_B Crystal structure of pectin methylesterase in complex with hexasaccharide VI [Dickeya dadantii 3937],2NTQ_A Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937],2NTQ_B Crystal structure of pectin methylesterase in complex with hexasaccharide VII [Dickeya dadantii 3937]
1QJV_A 3.71e-26 1341 1651 2 339
ChainA, PECTIN METHYLESTERASE [Dickeya chrysanthemi],1QJV_B Chain B, PECTIN METHYLESTERASE [Dickeya chrysanthemi]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D3JTC2 1.31e-71 1693 2029 32 370
Pectate lyase B OS=Paenibacillus amylolyticus OX=1451 GN=pelB PE=1 SV=1
Q43043 6.18e-29 1292 1627 6 327
Pectinesterase OS=Petunia integrifolia OX=4103 GN=PPE1 PE=2 SV=1
O04887 1.22e-25 1367 1651 214 500
Pectinesterase 2 OS=Citrus sinensis OX=2711 GN=PECS-2.1 PE=2 SV=1
Q9FJ21 2.12e-25 1366 1659 270 568
Probable pectinesterase/pectinesterase inhibitor 58 OS=Arabidopsis thaliana OX=3702 GN=PME58 PE=2 SV=1
P0C1A8 2.34e-25 1341 1651 26 363
Pectinesterase A OS=Dickeya chrysanthemi OX=556 GN=pemA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.008237 0.892523 0.096908 0.001723 0.000322 0.000251

TMHMM  Annotations      download full data without filtering help

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13 30