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CAZyme Information: MGYG000004880_01512

You are here: Home > Sequence: MGYG000004880_01512

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella;
CAZyme ID MGYG000004880_01512
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1557 169955.42 4.5398
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004880 2890596 MAG Spain Europe
Gene Location Start: 66848;  End: 71521  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004880_01512.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 127 495 5.4e-106 0.8393285371702638

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02055 Glyco_hydro_30 1.67e-24 54 433 2 348
Glycosyl hydrolase family 30 TIM-barrel domain.
COG5520 XynC 7.70e-20 52 496 46 428
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam17189 Glyco_hydro_30C 5.56e-04 445 494 12 63
Glycosyl hydrolase family 30 beta sandwich domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIU97167.1 3.06e-105 17 495 31 493
ABR38208.1 5.20e-105 17 494 28 499
QUT56489.1 5.20e-105 17 494 28 499
QQY39501.1 5.20e-105 17 494 28 499
QIU97424.1 1.05e-104 17 494 9 470

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2WNW_A 1.11e-13 56 479 48 424
Thecrystal structure of SrfJ from salmonella typhimurium [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],2WNW_B The crystal structure of SrfJ from salmonella typhimurium [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O16580 1.05e-24 19 469 61 485
Putative glucosylceramidase 1 OS=Caenorhabditis elegans OX=6239 GN=gba-1 PE=1 SV=2
Q7M4T0 1.72e-09 52 347 67 321
Endo-1,6-beta-D-glucanase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=neg-1 PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999391 0.000591 0.000034 0.000003 0.000001 0.000015

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004880_01512.