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CAZyme Information: MGYG000004881_00212

You are here: Home > Sequence: MGYG000004881_00212

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; UBA4716;
CAZyme ID MGYG000004881_00212
CAZy Family GH28
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
549 61569.75 5.0162
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004881 2323503 MAG China Asia
Gene Location Start: 6561;  End: 8210  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004881_00212.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH28 13 242 2.2e-38 0.6553846153846153

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 4.03e-12 12 264 237 508
Polygalacturonase [Carbohydrate transport and metabolism].
pfam00295 Glyco_hydro_28 1.94e-06 10 172 82 282
Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism.
PLN03010 PLN03010 5.22e-06 15 88 159 234
polygalacturonase
PLN02155 PLN02155 4.70e-04 14 175 146 306
polygalacturonase
PLN03003 PLN03003 0.002 20 95 145 221
Probable polygalacturonase At3g15720

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BCJ93866.1 2.78e-181 1 543 165 711
BCJ98361.1 1.55e-168 1 543 165 711
QIU92674.1 5.74e-39 12 252 245 476
AWV34270.1 9.04e-38 4 258 214 475
AIQ74952.1 2.34e-37 4 258 214 475

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000050 0.000003 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004881_00212.