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CAZyme Information: MGYG000004881_00561
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; UBA4716; | |||||||||||
| CAZyme ID | MGYG000004881_00561 | |||||||||||
| CAZy Family | GH167 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 81; End: 2312 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH167 | 10 | 562 | 5.1e-123 | 0.7754532775453278 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam02449 | Glyco_hydro_42 | 1.35e-15 | 36 | 250 | 75 | 289 | Beta-galactosidase. This group of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. The enzyme catalyzes the hydrolysis of terminal, non-reducing terminal beta-D-galactosidase residues. |
| COG1874 | GanA | 3.96e-09 | 35 | 421 | 96 | 489 | Beta-galactosidase GanA [Carbohydrate transport and metabolism]. |
| NF033190 | inl_like_NEAT_1 | 1.77e-08 | 561 | 676 | 636 | 753 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| NF033190 | inl_like_NEAT_1 | 2.52e-07 | 563 | 739 | 584 | 754 | NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading. |
| NF033921 | por_somb | 4.60e-05 | 708 | 741 | 28 | 61 | iron uptake porin. Proteins of this family have typical porin structures. It has been reported that Synechococcus outer membrane (Som) porins (SomA and SomB) are involved in iron uptake in cyanobacterium Synechococcus. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QNK59275.1 | 1.86e-115 | 14 | 741 | 713 | 1468 |
| QUL53851.1 | 1.68e-114 | 14 | 733 | 926 | 1741 |
| AIQ31958.1 | 5.95e-109 | 14 | 733 | 926 | 1753 |
| QNK56159.1 | 2.28e-108 | 14 | 733 | 1005 | 1757 |
| AIQ43288.1 | 3.43e-108 | 14 | 562 | 926 | 1467 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6PTM_A | 1.67e-18 | 86 | 520 | 298 | 730 | Crystalstructure of apo exo-carrageenase GH42 from Bacteroides ovatus [Bacteroides ovatus CL02T12C04] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P38535 | 1.31e-21 | 567 | 741 | 907 | 1085 | Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1 |
| P38536 | 1.97e-20 | 567 | 737 | 1681 | 1855 | Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2 |
| P36917 | 9.11e-13 | 567 | 669 | 1055 | 1157 | Endo-1,4-beta-xylanase A OS=Thermoanaerobacterium saccharolyticum OX=28896 GN=xynA PE=1 SV=1 |
| C6CRV0 | 3.01e-10 | 528 | 733 | 1242 | 1455 | Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1 |
| Q06852 | 7.39e-10 | 584 | 737 | 2099 | 2264 | Cell surface glycoprotein 1 OS=Acetivibrio thermocellus (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=olpB PE=3 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000033 | 0.000005 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |