dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000004883_01053

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Basic Information help

Species

Rothia mucilaginosa_B

Lineage

Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Micrococcaceae; Rothia; Rothia mucilaginosa_B

CAZyme ID

MGYG000004883_01053

CAZy Family

GT1

CAZyme Description

PGL/p-HBAD biosynthesis glycosyltransferase

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
397		43502.12	8.0588

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000004883	2241611	MAG	China	Asia

Gene Location

Start: 34568; End: 35761 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000004883_01053.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GT1	27	392	1e-31	0.9293193717277487

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG1819	YjiC	1.11e-32	1	391	1	397	UDP:flavonoid glycosyltransferase YjiC, YdhE family [Carbohydrate transport and metabolism].
cd03784	GT1_Gtf-like	1.15e-30	19	392	17	404	UDP-glycosyltransferases and similar proteins. This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
TIGR01426	MGT	2.70e-19	94	393	85	390	glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production. [Cellular processes, Toxin production and resistance]
COG0707	MurG	0.001	178	373	126	339	UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell wall/membrane/envelope biogenesis].

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
BAS19975.1	2.66e-273	1	397	1	401
ATF63122.1	2.34e-266	1	396	1	396
BAI65802.1	3.00e-262	1	396	8	405
QXW97654.1	1.28e-259	1	396	1	398
QKI10257.1	5.14e-225	1	393	1	395

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
2YJN_A	3.20e-09	209	397	244	438	Structureof the glycosyltransferase EryCIII from the erythromycin biosynthetic pathway, in complex with its activating partner, EryCII [Saccharopolyspora erythraea NRRL 2338]
3D0R_A	1.20e-08	3	393	22	396	Crystalstructure of calG3 from Micromonospora echinospora determined in space group P2(1) [Micromonospora echinospora],3D0R_B Crystal structure of calG3 from Micromonospora echinospora determined in space group P2(1) [Micromonospora echinospora],3OTI_A Crystal Structure of CalG3, Calicheamicin Glycostyltransferase, TDP and calicheamicin T0 bound form [Micromonospora echinospora],3OTI_B Crystal Structure of CalG3, Calicheamicin Glycostyltransferase, TDP and calicheamicin T0 bound form [Micromonospora echinospora]
3D0Q_A	4.86e-07	262	393	267	396	Crystalstructure of calG3 from Micromonospora echinospora determined in space group I222 [Micromonospora echinospora],3D0Q_B Crystal structure of calG3 from Micromonospora echinospora determined in space group I222 [Micromonospora echinospora]
4AMB_A	3.55e-06	216	389	221	395	Crystalstructure of the glycosyltransferase SnogD from Streptomyces nogalater [Streptomyces nogalater],4AMB_B Crystal structure of the glycosyltransferase SnogD from Streptomyces nogalater [Streptomyces nogalater]
4AMG_A	8.30e-06	216	379	221	385	Crystalstructure of the glycosyltransferase SnogD from Streptomyces nogalater [Streptomyces nogalater],4AMG_B Crystal structure of the glycosyltransferase SnogD from Streptomyces nogalater [Streptomyces nogalater],4AN4_A Crystal structure of the glycosyltransferase SnogD from Streptomyces nogalater [Streptomyces nogalater],4AN4_B Crystal structure of the glycosyltransferase SnogD from Streptomyces nogalater [Streptomyces nogalater],4AN4_C Crystal structure of the glycosyltransferase SnogD from Streptomyces nogalater [Streptomyces nogalater],4AN4_D Crystal structure of the glycosyltransferase SnogD from Streptomyces nogalater [Streptomyces nogalater]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
A5U6W6	2.91e-19	3	374	32	407	PGL/p-HBAD biosynthesis glycosyltransferase MRA_2985 OS=Mycobacterium tuberculosis (strain ATCC 25177 / H37Ra) OX=419947 GN=MRA_2985 PE=3 SV=1
P9WFR1	2.91e-19	3	374	32	407	PGL/p-HBAD biosynthesis glycosyltransferase Rv2958c OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2958c PE=1 SV=1
P9WFR0	2.91e-19	3	374	32	407	PGL/p-HBAD biosynthesis glycosyltransferase MT3034 OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=MT3034 PE=3 SV=1
P9WN09	1.58e-17	3	337	44	381	PGL/p-HBAD biosynthesis rhamnosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=Rv2962c PE=1 SV=1
Q7TXJ4	1.58e-17	3	337	44	381	PGL/p-HBAD biosynthesis rhamnosyltransferase OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) OX=233413 GN=BQ2027_MB2986C PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000059	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM Annotations help

There is no transmembrane helices in MGYG000004883_01053.