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CAZyme Information: MGYG000004899_03364

You are here: Home > Sequence: MGYG000004899_03364

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides sp900555635
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides sp900555635
CAZyme ID MGYG000004899_03364
CAZy Family GH55
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
998 MGYG000004899_23|CGC1 112278.87 6.4693
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000004899 5396709 MAG China Asia
Gene Location Start: 61380;  End: 64376  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000004899_03364.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH55 29 668 1.1e-90 0.8594594594594595

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3386 YvrE 4.72e-14 698 988 5 274
Sugar lactone lactonase YvrE [Carbohydrate transport and metabolism].
pfam12708 Pectate_lyase_3 3.72e-12 36 208 7 171
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
pfam08450 SGL 9.99e-12 899 987 145 243
SMP-30/Gluconolaconase/LRE-like region. This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species. These proteins include various enzymes, such as senescence marker protein 30 (SMP-30), gluconolactonase and luciferin-regenerating enzyme (LRE). SMP-30 is known to hydrolyze diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 and LRE.
pfam12708 Pectate_lyase_3 4.14e-11 369 422 1 60
Pectate lyase superfamily protein. This family of proteins possesses a beta helical structure like Pectate lyase. This family is most closely related to glycosyl hydrolase family 28.
cd05819 NHL 8.61e-07 724 959 12 226
NHL repeat unit of beta-propeller proteins. The NHL(NCL-1, HT2A and LIN-41)-repeat is found in multiple tandem copies, typically as 6 instances. It is about 40 residues long and resembles the WD repeat and other beta-propeller structures. The repeats have a catalytic activity in Peptidyl-glycine alpha-amidating monooxygenase; proteolysis has shown that the Peptidyl-alpha-hydroxyglycine alpha-amidating lyase (PAL) activity is localized to the repeats. Tripartite motif-containing protein 32 interacts with the activation domain of Tat. This interaction is mediated by the NHL repeats.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUU00135.1 0.0 1 998 11 1005
QBJ17509.1 0.0 2 998 11 1004
BBK89258.1 0.0 2 998 11 1004
QUT68914.1 0.0 2 998 11 1004
QQA31095.1 0.0 2 998 11 1004

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3EQN_A 2.62e-10 34 422 53 456
ChainA, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQN_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_A Chain A, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium],3EQO_B Chain B, Glucan 1,3-beta-glucosidase [Phanerodontia chrysosporium]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
D4B0V1 1.40e-06 369 527 511 666
Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) OX=663331 GN=ARB_02077 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.556040 0.442565 0.000345 0.000404 0.000314 0.000339

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000004899_03364.