Basic Information | |
---|---|
Species | Ricinus communis |
Cazyme ID | 27758.m000328 |
Family | CBM43 |
Protein Properties | Length: 481 Molecular Weight: 53138.9 Isoelectric Point: 5.8888 |
Chromosome | Chromosome/Scaffold: 27758 Start: 108708 End: 110412 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
---|
NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
---|---|---|---|
Family | Start | End | Evalue |
CBM43 | 369 | 449 | 1.5e-24 |
WCVLNKEVESKSMIPAEISYACSLADCSSLAYGSSCNKLDSDGNVSYAFNMYFQMNNQDVQACDFSGLATIVTQNASRGTC | |||
GH17 | 29 | 347 | 0 |
IGVNWGNIASHPLPPDIVVKMLKDNNINRVKLFDADAWTVNALAGSGIEVMVAIPNNMLQYIADSVDNAKDWVKENVTEYLRGQGGVDIRYVAVGNEPFL ASYNGSYDKTTFPALQNVQKALDEEGVGDKIKASVPLNADVYEGNLPSQGNFRKDVRDVMTKIVHHLHDHKAPFIVNIYPFISLYQSSSFPFEYAFFDGG GKKIQDKNVTYTNVFEANYDTLVWSLKKAGVPDLKILVGEVGWPTDGHVYANANLAKKFYDGLLKTLAAKKGTPLRPGVLDVYLFGLLDEDMKSNLPGNF ERHWGIFRFDGRPKFAMDF |
Full Sequence |
---|
Protein Sequence Length: 481 Download |
MAQACGLLLW GFCMVMVSTN VLSAVLPGIG VNWGNIASHP LPPDIVVKML KDNNINRVKL 60 FDADAWTVNA LAGSGIEVMV AIPNNMLQYI ADSVDNAKDW VKENVTEYLR GQGGVDIRYV 120 AVGNEPFLAS YNGSYDKTTF PALQNVQKAL DEEGVGDKIK ASVPLNADVY EGNLPSQGNF 180 RKDVRDVMTK IVHHLHDHKA PFIVNIYPFI SLYQSSSFPF EYAFFDGGGK KIQDKNVTYT 240 NVFEANYDTL VWSLKKAGVP DLKILVGEVG WPTDGHVYAN ANLAKKFYDG LLKTLAAKKG 300 TPLRPGVLDV YLFGLLDEDM KSNLPGNFER HWGIFRFDGR PKFAMDFSGQ GNDKMLIEAK 360 GVQYLPAKWC VLNKEVESKS MIPAEISYAC SLADCSSLAY GSSCNKLDSD GNVSYAFNMY 420 FQMNNQDVQA CDFSGLATIV TQNASRGTCL FPIQIVSHGD RLMLGYWVTI FAGFVVLPFF 480 I |
Functional Domains Download unfiltered results here | ||||||||
---|---|---|---|---|---|---|---|---|
Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 3.0e-5 | 250 | 338 | 93 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 2.0e-15 | 368 | 438 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 1.0e-28 | 368 | 451 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 3.0e-71 | 29 | 347 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
---|---|
GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3ur8_B | 0 | 29 | 348 | 3 | 315 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3ur8_A | 0 | 29 | 348 | 3 | 315 | A Chain A, Structure And Mechanisim Of Core 2 Beta1,6-N- Acetylglucosaminyltransferase: A Metal-Ion Independent Gt-A Glycosyltransferase |
PDB | 3ur7_B | 0 | 29 | 348 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 3ur7_A | 0 | 29 | 348 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |
PDB | 4gzj_A | 0 | 29 | 348 | 3 | 315 | A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase |