| Basic Information | |
|---|---|
| Species | Ricinus communis |
| Cazyme ID | 29777.m000270 |
| Family | CBM43 |
| Protein Properties | Length: 482 Molecular Weight: 52545.6 Isoelectric Point: 5.4616 |
| Chromosome | Chromosome/Scaffold: 29777 Start: 10923 End: 14219 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
 | |||
| Family | Start | End | Evalue |
| CBM43 | 363 | 445 | 1.8e-23 |
| WCVMKSSAKLDDPNVAPSVSYACGLGDCTSLGYGTSCGNLDARGNISYALNSYYQIQNQLDSACKFENISTITKSDPSTETCK | |||
| GH17 | 23 | 341 | 0 |
| IGANWGTQATHPLPPDTVVRLLRENGIQKVKLFDADYDALRALGKSGIEVMVGIPNDMLSSMAGSMKAAEKWVAKNVSTHITTNNVNIRYVAVGNEPFLE TYNGTFLSTTFPALQNVQSALIKAGLSNQVKVTVPLNADVYASSTGFPSGGDFRTDIHDLMINIVKFLSDSGSPFTVNIYPFISLYSDPNFPVEYAFFDG NAVPVNDGGTSYYNMFDANYDTLAYALQKNGFGNLPIIVGEIGWPTDGDKNANMIYAQRFNQGFMQRISGGKGTPLRPEPIDAYLFSLIDEDAKSIDPGN FERHWGIFTFDGRAKYTLN | |||
| Full Sequence |
|---|
| Protein Sequence Length: 482 Download |
| MGLCSVAIGL TWLFTTVSTV SGIGANWGTQ ATHPLPPDTV VRLLRENGIQ KVKLFDADYD 60 ALRALGKSGI EVMVGIPNDM LSSMAGSMKA AEKWVAKNVS THITTNNVNI RYVAVGNEPF 120 LETYNGTFLS TTFPALQNVQ SALIKAGLSN QVKVTVPLNA DVYASSTGFP SGGDFRTDIH 180 DLMINIVKFL SDSGSPFTVN IYPFISLYSD PNFPVEYAFF DGNAVPVNDG GTSYYNMFDA 240 NYDTLAYALQ KNGFGNLPII VGEIGWPTDG DKNANMIYAQ RFNQGFMQRI SGGKGTPLRP 300 EPIDAYLFSL IDEDAKSIDP GNFERHWGIF TFDGRAKYTL NLGTTNSRAL VEAKNVRYLE 360 RKWCVMKSSA KLDDPNVAPS VSYACGLGDC TSLGYGTSCG NLDARGNISY ALNSYYQIQN 420 QLDSACKFEN ISTITKSDPS TETCKFEIMI EPYYGGAKRT VGCPHKPLVL AAGLILFFLT 480 IL |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| COG5309 | COG5309 | 5.0e-6 | 255 | 333 | 79 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-14 | 362 | 433 | 79 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 1.0e-27 | 362 | 446 | 87 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 7.0e-75 | 23 | 341 | 321 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| EMBL | CBI38945.1 | 0 | 1 | 482 | 1 | 483 | unnamed protein product [Vitis vinifera] |
| RefSeq | XP_002273826.1 | 0 | 1 | 482 | 83 | 565 | PREDICTED: hypothetical protein [Vitis vinifera] |
| RefSeq | XP_002309034.1 | 0 | 23 | 462 | 4 | 444 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002331390.1 | 0 | 10 | 459 | 1 | 451 | predicted protein [Populus trichocarpa] |
| RefSeq | XP_002530371.1 | 0 | 1 | 482 | 1 | 482 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 23 | 342 | 2 | 315 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
| PDB | 3f55_C | 0 | 23 | 342 | 2 | 315 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
| PDB | 3f55_B | 0 | 23 | 342 | 2 | 315 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
| PDB | 3f55_A | 0 | 23 | 342 | 2 | 315 | A Chain A, Crystal Structure Of Glycogen Debranching Enzyme Trex From Sulfolobus Solfataricus |
| PDB | 3em5_D | 0 | 23 | 342 | 2 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
