Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29836.m000569 |
Family | CBM43 |
Protein Properties | Length: 480 Molecular Weight: 52363.5 Isoelectric Point: 4.8995 |
Chromosome | Chromosome/Scaffold: 29836 Start: 198824 End: 202240 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 365 | 444 | 9e-26 |
WCVADPAKDLSNVANHLRIACSVADCTTLNYGGSCNEIGAKGNISYAFNSYYQLQDQDAQSCDFDGLGMVTFLDPSVGDC | |||
GH17 | 26 | 344 | 0 |
IGVNWGTVSFRKLKPSTVVDLLKDNNIQKVKLFDTDPDVMKALVGSGIQVMVGIPNEMLASLSSSTAVSDMWVRQNISTYLVKGGVDIRYIAVGNEPFLS SYSGQFQSYVVPALQNLQQSLAKANLAGYVKLVVPCNADAYESSLPSQGTFRPELTDIMTQLVSFLNSNGSPFVVNIYPFLSLYGSTDFPQDYAFFGGST HPVTDGNNVYDNAFDGNFDTLVAALSKIGYGQMPIVIGEVGWPTDGAISANLTAARAFNQGLIKQVLSNKGTPLRPGSPPLDIYLFSLLDEGAKSTLPGN FERHWGIFSFDGQAKYSLN |
Full Sequence |
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Protein Sequence Length: 480 Download |
MSGFRATFFY LIIVLLDYTI GAESGIGVNW GTVSFRKLKP STVVDLLKDN NIQKVKLFDT 60 DPDVMKALVG SGIQVMVGIP NEMLASLSSS TAVSDMWVRQ NISTYLVKGG VDIRYIAVGN 120 EPFLSSYSGQ FQSYVVPALQ NLQQSLAKAN LAGYVKLVVP CNADAYESSL PSQGTFRPEL 180 TDIMTQLVSF LNSNGSPFVV NIYPFLSLYG STDFPQDYAF FGGSTHPVTD GNNVYDNAFD 240 GNFDTLVAAL SKIGYGQMPI VIGEVGWPTD GAISANLTAA RAFNQGLIKQ VLSNKGTPLR 300 PGSPPLDIYL FSLLDEGAKS TLPGNFERHW GIFSFDGQAK YSLNLGLGNR LLKNARNVQY 360 LPSRWCVADP AKDLSNVANH LRIACSVADC TTLNYGGSCN EIGAKGNISY AFNSYYQLQD 420 QDAQSCDFDG LGMVTFLDPS VGDCRFLVGV TDTSSSDFRL YHRWTVICSW TLWGMLVFLI 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 5.0e-5 | 199 | 336 | 139 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-17 | 364 | 433 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 8.0e-30 | 365 | 446 | 84 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-76 | 26 | 342 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 41 | 345 | 17 | 315 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 3f55_C | 0 | 41 | 345 | 17 | 315 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 3f55_B | 0 | 41 | 345 | 17 | 315 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 3f55_A | 0 | 41 | 345 | 17 | 315 | A Chain A, Crystal Structure Of A Methyltransferase-Like Protein (Spo2022) From Silicibacter Pomeroyi Dss-3 At 1.80 A Resolution |
PDB | 3em5_D | 0 | 41 | 345 | 17 | 315 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |