Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 29950.m001151 |
Family | CBM43 |
Protein Properties | Length: 480 Molecular Weight: 52804.9 Isoelectric Point: 5.0277 |
Chromosome | Chromosome/Scaffold: 29950 Start: 197449 End: 200981 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 367 | 448 | 2.5e-25 |
WCMFNPNAKDLSKLADNIDYACTFSDCTALGYGSSCNGLDSNGNASYAFNMYYQVQKQDDMACNFQGLAMVTTQNLSQGTCN | |||
GH17 | 23 | 344 | 0 |
LGVNWGTQATHKLPPKTVVQMLKDNGIQKVKLFDSDRNTMTALAGSGLEVMVAIPNDQLAAMNDYDRAKDWVKRNVSIYNFNGGVNIKYVAVGNEPFLTS YNGSFINITFPALQNIQNALNEAGVGDSVKATVPLNADVYNSPTDQPYPSAGRFRIDINDIMTNIVQFLHKNNAPFTVNIYPFLSLYGNDDFPFDYAFFD GAPQPVVDRGTGIQYTNVFDANFDTLVSALKAVGFGDMPIIVGEVGWPTDGDKNAKVDYAYRFYNGLLPRLAGNRGTPLRPGFIEVYLFGLLDEDAKSIA PGNFERHWGIFRYDGQPKFALD |
Full Sequence |
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Protein Sequence Length: 480 Download |
MGNSWFLRCV LLLGLLGSCV YGLGVNWGTQ ATHKLPPKTV VQMLKDNGIQ KVKLFDSDRN 60 TMTALAGSGL EVMVAIPNDQ LAAMNDYDRA KDWVKRNVSI YNFNGGVNIK YVAVGNEPFL 120 TSYNGSFINI TFPALQNIQN ALNEAGVGDS VKATVPLNAD VYNSPTDQPY PSAGRFRIDI 180 NDIMTNIVQF LHKNNAPFTV NIYPFLSLYG NDDFPFDYAF FDGAPQPVVD RGTGIQYTNV 240 FDANFDTLVS ALKAVGFGDM PIIVGEVGWP TDGDKNAKVD YAYRFYNGLL PRLAGNRGTP 300 LRPGFIEVYL FGLLDEDAKS IAPGNFERHW GIFRYDGQPK FALDLSGQGQ NKLLVGAQNV 360 QYQPSKWCMF NPNAKDLSKL ADNIDYACTF SDCTALGYGS SCNGLDSNGN ASYAFNMYYQ 420 VQKQDDMACN FQGLAMVTTQ NLSQGTCNFI IQIASSPSSL IHPSRVGFIF VTVLLTFLLL 480 |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0001 | 252 | 336 | 89 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-17 | 366 | 436 | 78 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-32 | 366 | 449 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-69 | 26 | 344 | 322 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | AAQ90287.1 | 0 | 20 | 480 | 25 | 480 | beta-1,3-glucanase, acidic [Coffea arabica] |
RefSeq | XP_002277003.1 | 0 | 5 | 453 | 6 | 453 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002319699.1 | 0 | 1 | 480 | 1 | 478 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002325410.1 | 0 | 1 | 480 | 1 | 508 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525445.1 | 0 | 1 | 480 | 1 | 480 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 3f55_D | 0 | 23 | 346 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_C | 0 | 23 | 346 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_B | 0 | 23 | 346 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3f55_A | 0 | 23 | 346 | 2 | 316 | A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities |
PDB | 3em5_D | 0 | 23 | 346 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |