Basic Information | |
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Species | Ricinus communis |
Cazyme ID | 30156.m001714 |
Family | CBM43 |
Protein Properties | Length: 395 Molecular Weight: 43194 Isoelectric Point: 6.6374 |
Chromosome | Chromosome/Scaffold: 30156 Start: 750899 End: 754029 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 278 | 357 | 3.7e-25 |
WCVVNNNQDLSNATASALDACSVADCTALSPGGSCFNISWPGNISYAFNSYYQQHDQRAESCDFGGLGLVTTIDPSVGNC | |||
GH17 | 150 | 258 | 3.3e-31 |
FHFDLSYDTLATALSMVGFPDMNIVISKIGWPTDGAANATSPLAETFMKGLMYHLRSRLGTPLRPQNPPIETYIFSLLDENQRSIATGNFERHWGVFTFD GQAKYHIDF | |||
GH17 | 8 | 150 | 7.09996e-41 |
IGVNWGTTASHPLPPPKAVELLKTNNISKVKLFDADPLVLQALSGSNIGVTVGIPNSMLKTLNSSKKAADSWVHDNVTRYFSAGTTGVRIQYVAVGDEPF HQSYGEQFHPFVIGTAINIQSALTRASLAGQIKVVIPCSYDTF |
Full Sequence |
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Protein Sequence Length: 395 Download |
MCWTAKGIGV NWGTTASHPL PPPKAVELLK TNNISKVKLF DADPLVLQAL SGSNIGVTVG 60 IPNSMLKTLN SSKKAADSWV HDNVTRYFSA GTTGVRIQYV AVGDEPFHQS YGEQFHPFVI 120 GTAINIQSAL TRASLAGQIK VVIPCSYDTF HFDLSYDTLA TALSMVGFPD MNIVISKIGW 180 PTDGAANATS PLAETFMKGL MYHLRSRLGT PLRPQNPPIE TYIFSLLDEN QRSIATGNFE 240 RHWGVFTFDG QAKYHIDFGQ GLKNPMNAQN VEYLPSKWCV VNNNQDLSNA TASALDACSV 300 ADCTALSPGG SCFNISWPGN ISYAFNSYYQ QHDQRAESCD FGGLGLVTTI DPSVGNCRFP 360 IEIKASHAHS LSGTDLFQWM VLLLLNAYFF LLHFT |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
pfam07983 | X8 | 3.0e-15 | 277 | 345 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-23 | 152 | 258 | 107 | + Glycosyl hydrolases family 17. | ||
pfam00332 | Glyco_hydro_17 | 2.0e-24 | 8 | 148 | 141 | + Glycosyl hydrolases family 17. | ||
smart00768 | X8 | 5.0e-30 | 277 | 359 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
RefSeq | XP_002269108.1 | 0 | 7 | 151 | 25 | 171 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002269108.1 | 0 | 152 | 382 | 245 | 475 | PREDICTED: hypothetical protein [Vitis vinifera] |
RefSeq | XP_002313970.1 | 0 | 4 | 155 | 18 | 169 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002313970.1 | 0 | 152 | 386 | 239 | 473 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002515703.1 | 0 | 1 | 395 | 1 | 395 | Glucan endo-1,3-beta-glucosidase, acidic isoform PR-O, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 2cyg_A | 5e-18 | 8 | 164 | 1 | 148 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 2cyg_A | 0.00000001 | 152 | 258 | 211 | 312 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 5e-16 | 8 | 141 | 2 | 131 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_D | 0.0000000000005 | 152 | 258 | 215 | 315 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
PDB | 3f55_C | 5e-16 | 8 | 141 | 2 | 131 | A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome |
EST Download unfiltered results here | ||||
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Hit | Length | Start | End | EValue |
FG891204 | 230 | 154 | 381 | 0 |
DW499352 | 230 | 152 | 381 | 0 |
GT622398 | 227 | 155 | 381 | 0 |
CV714551 | 206 | 176 | 381 | 0 |
CV289727 | 235 | 147 | 381 | 0 |
Sequence Alignments (This image is cropped. Click for full image.) |
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