Basic Information | |
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Species | Medicago truncatula |
Cazyme ID | AC233669_25.1 |
Family | CBM43 |
Protein Properties | Length: 495 Molecular Weight: 53752.6 Isoelectric Point: 6.5007 |
Chromosome | Chromosome/Scaffold: 2336692 Start: 100263 End: 102822 |
Description | O-Glycosyl hydrolases family 17 protein |
View CDS |
External Links |
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NCBI Taxonomy |
Plaza |
CAZyDB |
Signature Domain Download full data set without filtering | |||
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Family | Start | End | Evalue |
CBM43 | 372 | 454 | 5.4e-23 |
WCVVSSKSSGLSINNVANYMRTACSVADCTTLDYGGSCNGIGDKGNISYAFNSYYQLQMQDSRSCNFDGLGMVTSRDPSVGDC | |||
GH17 | 33 | 351 | 0 |
IGVNWGTVSFRKLNPSTVVDLLKDNKITKVKLFEAEADVLKALMGSGIQVMVGIPNEMLSLLSSSPSASDLWIHQNISAYTGKGGANIRYVAVGNEPFLK SYNGQFQNLVMPAVLNLQQSLVKAKLASSIKLVVPCNADVYESSIPSQGIFRPDLTQIMTQLVQFLNTNGSPFIVNIYPFLSLYDDTDFPQDYAFFEGTT HPVTDGSNIYSNAFDGNYDTLVAALGKIGYGQIPIVIGEIGWPSDGAIGANITAAKVFNQGLINHVLGNKGTPLRPNAPPMDIYLFSLLDEGAKSILPGS FERHWGIFYFDGKAKYPLN |
Full Sequence |
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Protein Sequence Length: 495 Download |
MTEPCCNRFG VGNLVKIMMF GLCWVPLLTE SAIGVNWGTV SFRKLNPSTV VDLLKDNKIT 60 KVKLFEAEAD VLKALMGSGI QVMVGIPNEM LSLLSSSPSA SDLWIHQNIS AYTGKGGANI 120 RYVAVGNEPF LKSYNGQFQN LVMPAVLNLQ QSLVKAKLAS SIKLVVPCNA DVYESSIPSQ 180 GIFRPDLTQI MTQLVQFLNT NGSPFIVNIY PFLSLYDDTD FPQDYAFFEG TTHPVTDGSN 240 IYSNAFDGNY DTLVAALGKI GYGQIPIVIG EIGWPSDGAI GANITAAKVF NQGLINHVLG 300 NKGTPLRPNA PPMDIYLFSL LDEGAKSILP GSFERHWGIF YFDGKAKYPL NLGLGNKELK 360 NAKNVQYLPS KWCVVSSKSS GLSINNVANY MRTACSVADC TTLDYGGSCN GIGDKGNISY 420 AFNSYYQLQM QDSRSCNFDG LGMVTSRDPS VGDCRFIIGL TDKATRSSGG SQIGYSWWFI 480 VAFSIIEITF SLLM* |
Functional Domains Download unfiltered results here | ||||||||
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Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
COG5309 | COG5309 | 0.0001 | 171 | 343 | 193 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
pfam07983 | X8 | 1.0e-13 | 371 | 443 | 80 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
smart00768 | X8 | 2.0e-25 | 371 | 456 | 88 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
pfam00332 | Glyco_hydro_17 | 5.0e-72 | 33 | 349 | 319 | + Glycosyl hydrolases family 17. |
Gene Ontology | |
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GO Term | Description |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
GO:0005975 | carbohydrate metabolic process |
Annotations - NR Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
GenBank | ABN08871.1 | 0 | 27 | 494 | 1 | 468 | Glycoside hydrolase, family 17; X8 [Medicago truncatula] |
EMBL | CAB10499.1 | 0 | 3 | 480 | 22 | 491 | glucanase like protein [Arabidopsis thaliana] |
RefSeq | NP_193451.2 | 0 | 10 | 480 | 2 | 464 | glycosyl hydrolase family 17 protein [Arabidopsis thaliana] |
RefSeq | XP_002329964.1 | 0 | 30 | 465 | 26 | 458 | predicted protein [Populus trichocarpa] |
RefSeq | XP_002525026.1 | 0 | 30 | 485 | 23 | 472 | Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] |
Annotations - PDB Download unfiltered results here | |||||||
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Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
PDB | 1ghr_A | 0 | 33 | 352 | 1 | 306 | A Chain A, Human Beta 1,3-Glucuronyltransferase I (Glcat-I) In Complex With Udp And Gal-Gal(6-So4)-Xyl(2-Po4)-O-Ser |
PDB | 1aq0_B | 0 | 33 | 352 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 1aq0_A | 0 | 33 | 352 | 1 | 306 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_D | 1.4013e-45 | 48 | 352 | 17 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |
PDB | 3f55_C | 1.4013e-45 | 48 | 352 | 17 | 315 | A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group |