| Basic Information | |
|---|---|
| Species | Brachypodium distachyon |
| Cazyme ID | Bradi1g56270.1 |
| Family | CBM43 |
| Protein Properties | Length: 495 Molecular Weight: 52574.9 Isoelectric Point: 6.4041 |
| Chromosome | Chromosome/Scaffold: 1 Start: 54912448 End: 54914834 |
| Description | O-Glycosyl hydrolases family 17 protein |
| View CDS | |
| External Links |
|---|
| NCBI Taxonomy |
| Plaza |
| CAZyDB |
| Signature Domain Download full data set without filtering | |||
|---|---|---|---|
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| Family | Start | End | Evalue |
| CBM43 | 376 | 457 | 8.4e-27 |
| WCALNPKAGDLGKLGEKIDYACSNADCTTLGYGSTCNGMDARGNASYAFNAYYQTQSQKDEACDFQGLALPTQTDPSTHACN | |||
| GH17 | 27 | 351 | 0 |
| LGVNWGTQASHPLPAKVVVQLLRDNGIKKVKLFETNLDAMSALAGSGIEVMAAIPNNMLHDMAADPKAARDWVKRNVKRFDFDGGVIIKYVAVGNEPFLE AYNGSFIKATLPALENIQNALNDAGAGDRIKATVPLNADVYNSPAKNPVPSAGRFRSDISGVMTDIVKFLAKNKAPFTVNIYPFLSLYLSDDFPLDFAFF DDGGPPVHDGGNGVTYTNVFDANFDTLVAALRAAGHGDMPVIVGEVGWPTDGDRRATAALAERFYGGLLKRLATTHGSPARPGQRIEAVYLFGLVDEDRK SVAPGSFERHWGIFRYDGQPKYGMD | |||
| Full Sequence |
|---|
| Protein Sequence Length: 495 Download |
| MASLGRVALL PVVVVAMAAA AAMVEGLGVN WGTQASHPLP AKVVVQLLRD NGIKKVKLFE 60 TNLDAMSALA GSGIEVMAAI PNNMLHDMAA DPKAARDWVK RNVKRFDFDG GVIIKYVAVG 120 NEPFLEAYNG SFIKATLPAL ENIQNALNDA GAGDRIKATV PLNADVYNSP AKNPVPSAGR 180 FRSDISGVMT DIVKFLAKNK APFTVNIYPF LSLYLSDDFP LDFAFFDDGG PPVHDGGNGV 240 TYTNVFDANF DTLVAALRAA GHGDMPVIVG EVGWPTDGDR RATAALAERF YGGLLKRLAT 300 THGSPARPGQ RIEAVYLFGL VDEDRKSVAP GSFERHWGIF RYDGQPKYGM DLAGQGRRAN 360 ARLVPAKGVE YLSRTWCALN PKAGDLGKLG EKIDYACSNA DCTTLGYGST CNGMDARGNA 420 SYAFNAYYQT QSQKDEACDF QGLALPTQTD PSTHACNFTI QIATSAAAPA PEPGVVVAAL 480 LMLALAQLVL LSSC* |
| Functional Domains Download unfiltered results here | ||||||||
|---|---|---|---|---|---|---|---|---|
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| Cdd ID | Domain | E-Value | Start | End | Length | Domain Description | ||
| pfam00925 | GTP_cyclohydro2 | 0.006 | 43 | 81 | 39 | + GTP cyclohydrolase II. GTP cyclohydrolase II catalyzes the first committed step in the biosynthesis of riboflavin. | ||
| COG5309 | COG5309 | 5.0e-5 | 257 | 343 | 91 | + Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] | ||
| pfam07983 | X8 | 2.0e-17 | 375 | 444 | 77 | + X8 domain. The X8 domain domain contains at least 6 conserved cysteine residues that presumably form three disulphide bridges. The domain is found in an Olive pollen allergen as well as at the C-terminus of several families of glycosyl hydrolases. This domain may be involved in carbohydrate binding. This domain is characteristic of GPI-anchored domains. | ||
| smart00768 | X8 | 2.0e-30 | 375 | 458 | 86 | + Possibly involved in carbohydrate binding. The X8 domain, which may be involved in carbohydrate binding, is found in an Olive pollen antigen as well as at the C terminus of family 17 glycosyl hydrolases. It contains 6 conserved cysteine residues which presumably form three disulfide bridges. | ||
| pfam00332 | Glyco_hydro_17 | 2.0e-70 | 27 | 351 | 325 | + Glycosyl hydrolases family 17. | ||
| Gene Ontology | |
|---|---|
| GO Term | Description |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
| GO:0005975 | carbohydrate metabolic process |
| Annotations - NR Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| GenBank | ACG29689.1 | 0 | 27 | 470 | 21 | 460 | glucan endo-1,3-beta-glucosidase 5 precursor [Zea mays] |
| RefSeq | NP_001051526.1 | 0 | 25 | 467 | 32 | 468 | Os03g0792800 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001058984.1 | 0 | 30 | 462 | 28 | 451 | Os07g0168600 [Oryza sativa (japonica cultivar-group)] |
| RefSeq | NP_001130924.1 | 0 | 27 | 470 | 22 | 461 | hypothetical protein LOC100192029 [Zea mays] |
| RefSeq | XP_002459388.1 | 0 | 15 | 470 | 17 | 467 | hypothetical protein SORBIDRAFT_02g003910 [Sorghum bicolor] |
| Annotations - PDB Download unfiltered results here | |||||||
|---|---|---|---|---|---|---|---|
| Source | Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
| PDB | 3f55_D | 0 | 27 | 353 | 2 | 316 | A Chain A, Crystal Structure Of Beta-Glucuronidase From Acidobacterium Capsulatum |
| PDB | 3f55_C | 0 | 27 | 353 | 2 | 316 | A Chain A, Crystal Structure Of Beta-Glucuronidase From Acidobacterium Capsulatum |
| PDB | 3f55_B | 0 | 27 | 353 | 2 | 316 | A Chain A, Crystal Structure Of Beta-Glucuronidase From Acidobacterium Capsulatum |
| PDB | 3f55_A | 0 | 27 | 353 | 2 | 316 | A Chain A, Crystal Structure Of Beta-Glucuronidase From Acidobacterium Capsulatum |
| PDB | 3em5_D | 0 | 27 | 353 | 2 | 316 | A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis |
